Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30272
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92830-11|CAB07351.1|  165|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork head/HNF-3...    27   9.6  

>Z92830-11|CAB07351.1|  165|Caenorhabditis elegans Hypothetical
           protein F11A5.13 protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 62  FGFNLLFYLRIVFVCLFTACLRK 130
           FGF L   +  V++C+FT CL K
Sbjct: 116 FGFALSLVIISVYICIFTKCLVK 138


>Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical
           protein F38A6.1c protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 208 NTTGNHTPYKVRKQTLFILNYNTSNRFLT 294
           NTT N+ PY+ +     +LNYN  +++ T
Sbjct: 12  NTTLNYQPYQYQTAANGLLNYNNYSQYAT 40


>Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical
           protein F38A6.1b protein.
          Length = 442

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 208 NTTGNHTPYKVRKQTLFILNYNTSNRFLT 294
           NTT N+ PY+ +     +LNYN  +++ T
Sbjct: 43  NTTLNYQPYQYQTAANGLLNYNNYSQYAT 71


>Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical
           protein F38A6.1a protein.
          Length = 506

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 208 NTTGNHTPYKVRKQTLFILNYNTSNRFLT 294
           NTT N+ PY+ +     +LNYN  +++ T
Sbjct: 107 NTTLNYQPYQYQTAANGLLNYNNYSQYAT 135


>U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork
           head/HNF-3-like protein protein.
          Length = 506

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 208 NTTGNHTPYKVRKQTLFILNYNTSNRFLT 294
           NTT N+ PY+ +     +LNYN  +++ T
Sbjct: 107 NTTLNYQPYQYQTAANGLLNYNNYSQYAT 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,557,552
Number of Sequences: 27780
Number of extensions: 224304
Number of successful extensions: 536
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)