Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30270
(463 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 62 2e-10
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 59 1e-09
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 50 9e-07
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 45 3e-05
10_02_0119 + 5488469-5488647,5489030-5489195 29 2.4
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545... 29 2.4
07_01_0087 + 676501-677907 29 2.4
06_01_0417 - 2972877-2973876,2973946-2974851,2975823-2976616,297... 29 2.4
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 28 3.2
11_01_0237 + 1822218-1822252,1823164-1824145,1824261-1824893 27 5.6
10_08_0412 - 17729765-17730283,17731256-17731726 27 5.6
12_01_0669 + 5693047-5693141,5694222-5694344,5694528-5694630,569... 27 7.3
12_01_0235 + 1765117-1766770,1766881-1766984 27 7.3
09_04_0241 + 15962439-15962795,15962809-15963102 27 7.3
06_01_0440 + 3127197-3127700,3128299-3128670 27 7.3
01_06_1655 + 38940790-38940864,38941245-38942057,38942149-389422... 27 7.3
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 27 9.7
03_04_0080 + 17110136-17110388,17110851-17110921,17111604-171116... 27 9.7
01_05_0674 - 24187820-24188713,24188809-24189204 27 9.7
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/118 (27%), Positives = 61/118 (51%)
Frame = +2
Query: 83 IPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDL 262
+PKK + +RPI++ + K++ +++ +L + +L+SD YGF G++ D
Sbjct: 376 VPKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVI--LKLVSDNHYGFIKGKTIQDC 433
Query: 263 LVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASLF 436
+ + +SK E + + LD KAFD + H A+LS + G P +W+ +F
Sbjct: 434 PAWPFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVF 491
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 59.3 bits (137), Expect = 1e-09
Identities = 36/122 (29%), Positives = 56/122 (45%)
Frame = +2
Query: 68 AHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGR 247
A++ I K G + YRPI++ + K++ +++ +L + ++I Q GF GR
Sbjct: 971 AYIVLIQKPGKENTVDGYRPISLQNCSVKILSKVLATRLQRVF--LRMIHLDQTGFLKGR 1028
Query: 248 SAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIA 427
+ L+Y T K + + V LD KAFD V +L L G PE WI
Sbjct: 1029 CISENLIYATELIQACYRRKCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIK 1088
Query: 428 SL 433
L
Sbjct: 1089 GL 1090
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 50.0 bits (114), Expect = 9e-07
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = +2
Query: 83 IPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGD- 259
IPKK D YRPI++ +++ KV+ + + +L L+D L+S Q F GR D
Sbjct: 955 IPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDD--LVSKEQSAFIQGRMITDN 1012
Query: 260 -LLVY-LTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYG 397
LL + H + ++ A A LD++KA+DRV R L L G
Sbjct: 1013 ALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNKLG 1060
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +2
Query: 224 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIP 403
Q GF GR + L+Y T K + L + LD AKAFD V ++L L G P
Sbjct: 6 QTGFLKGRCISENLIYATELIQACHARKCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFP 65
Query: 404 EGLCKWIASL 433
+ WI +L
Sbjct: 66 DNWISWIKNL 75
>10_02_0119 + 5488469-5488647,5489030-5489195
Length = 114
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -1
Query: 244 TVTETVLSVTDQLAILQILQELYINYSLHHLGKQGSYRDRPIARWVRPVTLLGDRVDVG 68
T T T L + D + + L +++ L H G + YRD P AR + LGD V+ G
Sbjct: 28 TTTSTQLPI-DVVVGGPLAASLNMDHELGHYGPRDRYRDPPSARRIEE---LGDSVEHG 82
>09_06_0032 +
20353789-20353963,20354240-20354340,20354426-20354560,
20354633-20354714,20354829-20354896,20354984-20355073,
20355133-20355257,20355384-20355717,20355841-20355957,
20356058-20356485,20356564-20356813,20356944-20357194,
20357278-20357587
Length = 821
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 110 PSSYRPIAITSLLSKVMERIINI--QLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHR 283
P+S + +L + E I N+ QL + +E + + + FR S GD+ +L R
Sbjct: 349 PASASCTSHAEILREKDELIKNLEEQLKELMEQKDTVQSQLDNFRKVASDGDINNHLARR 408
Query: 284 WAEALES 304
W+ + +S
Sbjct: 409 WSRSSDS 415
>07_01_0087 + 676501-677907
Length = 468
Score = 28.7 bits (61), Expect = 2.4
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +2
Query: 131 AITSLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSA-GDLLVYLTHRWAEA--LE 301
A+T +SK++ R N+ L +E L D F G D +VY T L+
Sbjct: 241 AMTPAMSKILARYDNLHLHPQIE--HLREDGTVVFVDGTCVVADAVVYCTGNTYSYPFLD 298
Query: 302 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIP 403
+ G+ + FD V+ AL L GIP
Sbjct: 299 TDGKVTVDDNRVGPLFDHVFPPALAPSLSFVGIP 332
>06_01_0417 -
2972877-2973876,2973946-2974851,2975823-2976616,
2977887-2977977,2978305-2978384
Length = 956
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 53 SSWKTAHVH-PIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQY 229
S+W++ P KG R ++ + S+ +RI NIQ L R+L + +
Sbjct: 334 SAWESIRCALPDNLKGSRIIVTTRNADVANTCCSRPQDRIYNIQRLSETTSRELFFKKIF 393
Query: 230 GFRHGRSAGD 259
GF +S D
Sbjct: 394 GFADDKSPTD 403
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 56 SWKTAH-VHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYL 196
+W+ A+ V P KKG DPS Y I + K ER + + ++ YL
Sbjct: 281 AWQAANFVKPDTKKGGSMDPSDYVKIKCIA-SGKPSERFVLVCIVAYL 327
>11_01_0237 + 1822218-1822252,1823164-1824145,1824261-1824893
Length = 549
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 RHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLC 415
RH GD L H +A+ LE++ A A SL+ + + L +Y + C
Sbjct: 227 RHSSPTGDATERLAHYFADGLEAR-LAGAASLERRLVASAEERASAMELLEAYQVFMAAC 285
Query: 416 --KWIASLF 436
KW+A F
Sbjct: 286 CFKWVAFTF 294
>10_08_0412 - 17729765-17730283,17731256-17731726
Length = 329
Score = 27.5 bits (58), Expect = 5.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 344 PSRYQGSQQEPRPCSPRLQPTCE 276
PSRY+ ++Q+ + C+P TC+
Sbjct: 244 PSRYEINKQQVQQCTPSFTATCD 266
>12_01_0669 +
5693047-5693141,5694222-5694344,5694528-5694630,
5694793-5695041
Length = 189
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 376 QKCPMPDPVEGLRDIKAHSKSL---ALALQGFSPPVSKVY 266
+K +P+ V R K H SL A+ + GF PP ++V+
Sbjct: 46 KKIELPEDVYVKRFFKKHPDSLYHDAIKISGFDPPPARVF 85
>12_01_0235 + 1765117-1766770,1766881-1766984
Length = 585
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 RHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLC 415
RH GD L H +A+ LE++ A A SL+ + + L +Y + C
Sbjct: 195 RHSSPTGDATERLAHYFADGLEAR-LAGAASLEHRLLASAEERASAMELLEAYQVFMAAC 253
Query: 416 --KWIASLF 436
KW+A F
Sbjct: 254 CFKWVAFTF 262
>09_04_0241 + 15962439-15962795,15962809-15963102
Length = 216
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 272 LTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEG 409
L HR+AE+L ++ A+AVS D A + R L ++ G P G
Sbjct: 15 LFHRYAESLAARAAAVAVSFDYRVAPEHPCARGLRRRVG--GAPVG 58
>06_01_0440 + 3127197-3127700,3128299-3128670
Length = 291
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 360 GIGHFCRSYHLTESPRVSASGSLAFFGWA 446
GIGH R+ + R S G+ WA
Sbjct: 169 GIGHIARAIRFVRAERASTDGTFPHVAWA 197
>01_06_1655 +
38940790-38940864,38941245-38942057,38942149-38942268,
38942883-38943566
Length = 563
Score = 27.1 bits (57), Expect = 7.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 389 SYGIPEGLCKWIASLFWMGGAS 454
S+G+ + + W S FW GGA+
Sbjct: 493 SFGLGQSIGSWAKSPFWKGGAA 514
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 137 TSLLSKVMERIINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALES 304
T L+++ +E ++ YL D L+ ++ HG+ A L+ T R A+ALE+
Sbjct: 461 TDLIAQRVEFVLEADKRSYLMD--LLHAQKANGTHGKQALTLVFVETKRGADALEN 514
>03_04_0080 +
17110136-17110388,17110851-17110921,17111604-17111634,
17111677-17111693
Length = 123
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 369 HFCRSYHLTESPRVSASGSLAFFGW 443
HFC S T SPR A+G++ + G+
Sbjct: 68 HFCASGMDTGSPRRPATGTIRYLGY 92
>01_05_0674 - 24187820-24188713,24188809-24189204
Length = 429
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 362 ARPCRRPSRYQGSQQEPRPCSPRLQPTCE*GIQEDRQLSDRDGNRT 225
A P P Q + +P P P LQP C+ I+E+R +D D RT
Sbjct: 284 AAPRSPPGDAQVAANQPPP--PPLQPQCQPHIKEER--ADDDDVRT 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,010,511
Number of Sequences: 37544
Number of extensions: 348308
Number of successful extensions: 958
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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