Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30270
(463 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 96 2e-20
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 96 2e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 90 2e-18
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 84 8e-17
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 83 1e-16
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 83 1e-16
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 83 1e-16
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 83 1e-16
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 83 1e-16
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 83 2e-16
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 81 5e-16
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 81 5e-16
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 79 2e-15
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 79 3e-15
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 79 3e-15
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 79 4e-15
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 79 4e-15
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 79 4e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 78 5e-15
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 78 7e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 76 2e-14
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 75 5e-14
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 65 4e-11
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 60 2e-09
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 54 1e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 46 2e-05
AE014298-691|AAF45995.3| 840|Drosophila melanogaster CG4041-PA ... 31 1.00
AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-P... 29 3.0
BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p pro... 28 5.3
AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p pro... 28 5.3
AE014296-921|ABC66129.1| 158|Drosophila melanogaster CG34047-PA... 28 7.0
BT024352-1|ABC86414.1| 298|Drosophila melanogaster IP09275p pro... 27 9.3
AE014297-2613|AAF55623.1| 297|Drosophila melanogaster CG14285-P... 27 9.3
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +2
Query: 38 ANRVPSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLI 214
A P WK A + PI K G D P SYRPI++ S LSK++E++I ++L+K+L+ +
Sbjct: 510 AGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTL 569
Query: 215 SDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSY 394
QYGFR+G + + L + E+++SK V+LDI AFD VWH LL KL
Sbjct: 570 PTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMI 629
Query: 395 GIPEGLCK 418
G P L K
Sbjct: 630 GTPIYLIK 637
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +2
Query: 38 ANRVPSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLI 214
A P WK A + PI K G D P SYRPI++ S LSK++E++I ++L+K+L+ +
Sbjct: 458 AGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTL 517
Query: 215 SDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSY 394
QYGFR+G + + L + E+++SK V+LDI AFD VWH LL KL
Sbjct: 518 PTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMI 577
Query: 395 GIPEGLCK 418
G P L K
Sbjct: 578 GTPIYLIK 585
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSD-PSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P WK A + I K G + P SYRPI++ S LSK+ ER+I +L + +R+++ D Q
Sbjct: 490 PKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQ 549
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR G S + + LT +A + K AV +D+ +AFDRVWH L+SK+
Sbjct: 550 FGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKV 602
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 84.2 bits (199), Expect = 8e-17
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G ++P SYRPI++ S LSK+ ER++ +L K ++ I Q
Sbjct: 534 PEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQ 593
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 594 FGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L + ++ I Q
Sbjct: 418 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQ 477
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 478 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 530
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L + ++ I Q
Sbjct: 534 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQ 593
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 594 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L + ++ I Q
Sbjct: 534 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQ 593
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 594 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L + ++ I Q
Sbjct: 496 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQ 555
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 556 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 608
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 83.4 bits (197), Expect = 1e-16
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G +DP SYRPI++ S LSK+ ER++ +L + ++ I Q
Sbjct: 534 PDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQ 593
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 594 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 646
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRS-DPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK A V I K G S +P SYRPI++ S LSK+ ER++ +L + ++ I Q
Sbjct: 546 PEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQ 605
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR + +T EA E K AV LDI++AFDRVWH LL KL
Sbjct: 606 FGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKL 658
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 81.4 bits (192), Expect = 5e-16
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P WK + + IPK G D++ PSSYRPI++ + LSK+ E+++ +++ +L + Q
Sbjct: 485 PQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQ 544
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPE 406
+GFR + + +T A E + A+ LD+A+AFDRVW LL K+ +P+
Sbjct: 545 FGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQ 603
Query: 407 GLCKWIASLFW 439
K + S +
Sbjct: 604 NTHKLLKSYLY 614
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 81.4 bits (192), Expect = 5e-16
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P WK + + IPK G D++ PSSYRPI++ + LSK+ E+++ +++ +L + Q
Sbjct: 485 PQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQ 544
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPE 406
+GFR + + +T A E + A+ LD+A+AFDRVW LL K+ +P+
Sbjct: 545 FGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQ 603
Query: 407 GLCKWIASLFW 439
K + S +
Sbjct: 604 NTHKLLKSYLY 614
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Frame = +2
Query: 44 RVPSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISD 220
+ P +W++A + PI K SD +SYRPI++ S L K +E+II +L +++ LIS
Sbjct: 487 KYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISH 546
Query: 221 RQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGI 400
Q F+ S D L+ + H + AL +K ++ D +AFDRV A+L +L +GI
Sbjct: 547 NQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGI 606
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 79.0 bits (186), Expect = 3e-15
Identities = 43/140 (30%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Frame = +2
Query: 8 LTRLYRISYCANRVPSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQL 184
+T+L+ + ++ +P ++KT+ + PI K D++ SSYRPI++ ++K++++II +L
Sbjct: 471 ITKLFNEIFNSH-IPQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRL 529
Query: 185 LKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWH 364
+ LI+D+Q+GF+ G+S D L+Y+ + +SK V+LD ++AFDRV
Sbjct: 530 WWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYL---ITKSKMHTSLVTLDFSRAFDRVGV 586
Query: 365 RALLSKLPSYGIPEGLCKWI 424
+++ +L + + K+I
Sbjct: 587 HSIIQQLQEWKTGPKIIKYI 606
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 79.0 bits (186), Expect = 3e-15
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P+ WK A + IPK G +SYRPI++ S LSK++ERI+ +L + I Q
Sbjct: 537 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQ 596
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 597 FGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P+ WK A + IPK G +SYRPI++ S LSK++ERI+ +L + I Q
Sbjct: 90 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQ 149
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 150 FGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 202
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P+ WK A + IPK G +SYRPI++ S LSK++ERI+ +L + I Q
Sbjct: 537 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQ 596
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 597 FGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRSDP-SSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P+ WK A + IPK G +SYRPI++ S LSK++ERI+ +L + I Q
Sbjct: 537 PNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQ 596
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR A L +T +A + K A LDI +AFDRVWH LL KL
Sbjct: 597 FGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 78.2 bits (184), Expect = 5e-15
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK+A + I K G +D SYRPI++ L K+MER+I +LL + + I Q
Sbjct: 293 PKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQ 352
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSK 382
+GFR + L + + EA+E+K A+ LDI +AFDRVWH LL K
Sbjct: 353 FGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYK 404
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 77.8 bits (183), Expect = 7e-15
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGD-RSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P WK + I K G +P+SYRPI++ +SKV ER+I ++++ +E + + + Q
Sbjct: 489 PYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQ 548
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
+GFR G + L + + A +SK ++ LDI +AFDRVWH L K+
Sbjct: 549 FGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHIGLQLKI 601
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 76.2 bits (179), Expect = 2e-14
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDR-SDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P +WK+A + I K G +D SYRP ++ L K+MER+I +LL + + I Q
Sbjct: 491 PKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQ 550
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSK 382
+GFR + L + + EA+E+K A+ LDI +AFDRVWH LL K
Sbjct: 551 FGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYK 602
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 74.9 bits (176), Expect = 5e-14
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = +2
Query: 8 LTRLYRISYCANRVPSSWKTAHVHPIPKKG-DRSDPSSYRPIAITSLLSKVMERIINIQL 184
+T+L+ P WK + IPK G + + SSYRPI++ S +SK+ E+ + I+L
Sbjct: 473 ITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRL 532
Query: 185 LKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWH 364
++ +I Q+GFR + + +T A E + AV LD+++AFD+VW
Sbjct: 533 NQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWL 592
Query: 365 RALLSKLPSYGIPEGLCKWIASLFW 439
L+ K+ +PE K + S +
Sbjct: 593 DGLMFKI-KISLPESTHKLLKSYLY 616
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +2
Query: 50 PSSWKTAHVHPIPK-KGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P WK + + IPK + D++ PS YRPI++ + LSK+ E+ + +++ +L+ + Q
Sbjct: 27 PQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQ 85
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPE 406
+ F A + + +T A E + A+ LD+A+AFDRVW L+ K+ +P+
Sbjct: 86 FDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LPQ 144
Query: 407 GLCKWIAS 430
+ K + S
Sbjct: 145 NIHKLLKS 152
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = +2
Query: 50 PSSWKTAHVHPIPK-KGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDRQ 226
P WK + + K KG + P SYRP+ + ++ K+ ERI+ ++ E + +Q
Sbjct: 455 PKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQ 514
Query: 227 YGFRHGRSAGDLLVYLTHRWAEALE-------SKGEALAVSLDIAKAFDRVWHRALLSKL 385
YGFR G+S D L +T +AL+ SK ++LD+ AF+ +L +
Sbjct: 515 YGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAM 574
Query: 386 PSYGIPEGLCKWIASLF 436
+ G+P+ + I + F
Sbjct: 575 RNLGVPDYIRGVIGNYF 591
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/143 (25%), Positives = 64/143 (44%)
Frame = +2
Query: 26 ISYCANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINIQLLKYLEDR 205
I +C N +P S + A IPK P +RPI++ S+L + + I+ +L +
Sbjct: 385 ILWCGN-LPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSIN-- 441
Query: 206 QLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 385
RQ GF D + + + +LD++KAFD + H ++ L
Sbjct: 442 --WDPRQRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTL 499
Query: 386 PSYGIPEGLCKWIASLFWMGGAS 454
+YG P+G ++ + + GG S
Sbjct: 500 RAYGAPKGFVDYVQNTYEGGGTS 522
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 50 PSSWKTAHVHPIPKKGDRS--DPSSYRPIAITSLLSKVMERIINIQLLKYLEDRQLISDR 223
P+ WK V + K D+ +PSSYR I + + KV+E I+ ++ + L +
Sbjct: 487 PAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRW 543
Query: 224 QYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIP 403
Q+GFR GR D ++ + + + L +D AFD V A LS+L G
Sbjct: 544 QFGFRQGRCVEDAWRHV--KSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLGCR 601
Query: 404 E 406
E
Sbjct: 602 E 602
>AE014298-691|AAF45995.3| 840|Drosophila melanogaster CG4041-PA
protein.
Length = 840
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 172 NYSLHHLGKQGSYRDRPIA--RWVRPVTLLG 86
NY LHH+ K G+Y PI R++ P LLG
Sbjct: 138 NYGLHHMTKGGAYVPFPIGNIRYMAPERLLG 168
>AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-PA
protein.
Length = 1534
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = -3
Query: 416 CRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPRLQPTCE*GIQEDRQLSDRD 237
C + GF A P PC++P SQQ P S Q + +Q+ + R
Sbjct: 844 CPNQHGFIPPTAQDSSPVTSPCQKPPSSPPSQQS--PSSATAQQSSPMALQKTQSCPARQ 901
Query: 236 GNRTVGH*SAGDPPDTSG 183
+ ++ +P D+SG
Sbjct: 902 SSTSIQE----NPMDSSG 915
>BT025826-1|ABF85726.1| 391|Drosophila melanogaster IP06836p
protein.
Length = 391
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 425 RSTCRDP-RGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPRLQPTC 279
R TCR P V +T +R CR+ G ++ C PR +P C
Sbjct: 310 RMTCRMPWTRTATRVPTTVTSGSRRCRKCRTAAGQRESAALCRPRPRPRC 359
>AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p
protein.
Length = 1196
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = -3
Query: 416 CRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRPCSPRLQPTCE*GIQEDRQLSDRD 237
C + GF A P PC++P SQQ P S Q + +Q+ + R
Sbjct: 506 CPNQHGFIPPTAQDSSPVTSPCQKPPSSPPSQQS--PSSATAQQSSPMALQKTQSCPARQ 563
Query: 236 GNRTVGH*SAGDPPDTSG 183
+ + +P D+SG
Sbjct: 564 SSTPIQE----NPMDSSG 577
>AE014296-921|ABC66129.1| 158|Drosophila melanogaster CG34047-PA
protein.
Length = 158
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 380 KLPSYGIPEGLCKWIASLFWMG 445
+L +GIP LC+WI +F G
Sbjct: 116 ELGQWGIPSSLCRWIHGMFPRG 137
>BT024352-1|ABC86414.1| 298|Drosophila melanogaster IP09275p
protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 244 TVTETVLSVTDQLAILQILQELYINYSLHHLGKQGSYRDRPIARWVRPVTLLGDRVD 74
++ E V S+ + ++ +++L + S GK G Y ++ + P+ LLG VD
Sbjct: 133 SLVEEVKSLAGEQNLIYTVRDLDVVVSQVAEGKSGKYSNKAVIPGKSPLHLLGPMVD 189
>AE014297-2613|AAF55623.1| 297|Drosophila melanogaster CG14285-PA
protein.
Length = 297
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 244 TVTETVLSVTDQLAILQILQELYINYSLHHLGKQGSYRDRPIARWVRPVTLLGDRVD 74
++ E V S+ + ++ +++L + S GK G Y ++ + P+ LLG VD
Sbjct: 132 SLVEEVKSLAGEQNLIYTVRDLDVVVSQVAEGKSGKYSNKAVIPGKSPLHLLGPMVD 188
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,524,439
Number of Sequences: 53049
Number of extensions: 528138
Number of successful extensions: 1262
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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