Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30269
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 60 2e-10
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 44 2e-05
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 38 0.001
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 33 0.025
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.076
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 30 0.23
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.23
SPCC1840.09 |||NAD dependent epimerase/dehydratase family protei... 30 0.31
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.31
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 29 0.53
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.71
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 1.6
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 27 2.2
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 27 2.2
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 3.8
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.0
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.0
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 5.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 26 5.0
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 26 5.0
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 6.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.6
SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.6
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 25 8.7
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 25 8.7
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 25 8.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.7
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 60.5 bits (140), Expect = 2e-10
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 315 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 491
+ TP FP+S++EG + + K+ G+ V DE + +ETDK PV AP GV+KE VK+G
Sbjct: 45 IKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEG 104
Query: 492 ETVKAGQKL 518
+T+ Q +
Sbjct: 105 DTITIDQDI 113
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 324 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETV 500
P+ ++ EG++ K K GDS + +++LE+ETDK + V +G++ ++ ++ G +
Sbjct: 41 PALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGSNI 100
Query: 501 KAGQKL 518
G+ +
Sbjct: 101 PVGKNI 106
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 315 VTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 491
+ P+ +++ G++ KK+GD + +V+ EIETDK I G + ++ ++ G
Sbjct: 56 INMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKILIETG 115
Query: 492 -ETVKAGQKL 518
+ V G+ L
Sbjct: 116 TKDVPVGKPL 125
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 33.5 bits (73), Expect = 0.025
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = -2
Query: 505 ALTVSPSLTYNSLMTP----WPGAMTGMAVL-----SVSISRTTSSAATLSPTFLSNLTS 353
+L +P Y SLM W +TG VL S S+S TTSS+++ SP+ S T+
Sbjct: 93 SLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTT 152
Query: 352 PSETESGKLGVVTSCSTS 299
S + S +S S+S
Sbjct: 153 TSPSSSSSSSSSSSSSSS 170
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.076
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -2
Query: 544 ASPVISNLNS-FCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFL 368
A+P S+ S F + T S + +Y+S ++ + T S S TSS T S T
Sbjct: 76 ATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTES 135
Query: 367 SNLTSPSETESGKLGVVTSCSTS 299
S+L PS S L TS S
Sbjct: 136 SSLLDPSSVSSAILPSSTSVEVS 158
Score = 27.1 bits (57), Expect = 2.2
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = -2
Query: 571 ASVAAAFLGASPVI------SNLNSFCPALTVSPSLTYNSLMTPWPG-AMTGMAVLSVSI 413
+SV++A L +S + S+L+S P + + S +S + P + T + S +
Sbjct: 142 SSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAA 201
Query: 412 SRTTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTS 299
+TSS+ S + +S+ +SPS + S L +S STS
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSSTL-TSSSLSTS 238
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 30.3 bits (65), Expect = 0.23
Identities = 28/99 (28%), Positives = 43/99 (43%)
Frame = -2
Query: 586 VSTFGASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISR 407
V T +S+A + + AS +S N VS + +S + + S +IS
Sbjct: 219 VPTSSSSIALSSVVASASVSAANKGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISS 278
Query: 406 TTSSAATLSPTFLSNLTSPSETESGKLGVVTSCSTSRGF 290
TSS+A+ SPT S + SGK G+ T G+
Sbjct: 279 ATSSSASASPT--------SSSVSGKRGLAWIPGTDLGY 309
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.23
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Frame = -2
Query: 583 STFGASVAAAFLGASPVISNLNSFCPALTVSP-SLTYNSLMTPWPGAMTGMAVLSVSISR 407
S +S ++ +S ++S ++ +T S SLT S + P ++ +++ S S
Sbjct: 689 SPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSN 748
Query: 406 T-----TSSAATLSPTFLSNLTS--PSETESGKLGVVTSCST 302
T TSS+A +S T +SN++S PS T S + +T+ ST
Sbjct: 749 TLLSSITSSSAIVSSTTVSNISSNLPSATASSQ-SQLTNSST 789
Score = 29.9 bits (64), Expect = 0.31
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -2
Query: 535 VISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLT 356
+ S ++S T S + S T P + T +++ S S S T SSA+T SP+ +S+
Sbjct: 560 ISSGISSSSIPSTFSSVSSILSSSTSSPSS-TSLSISSSSTSSTFSSASTSSPSSISSSI 618
Query: 355 SPSET 341
S S T
Sbjct: 619 SSSST 623
Score = 25.8 bits (54), Expect = 5.0
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -2
Query: 583 STFGASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPWPGAMTG-MAVLSVSISR 407
ST +A+ S + S+++S L+ SP+ + +SLM ++G ++LS SIS
Sbjct: 598 STSSTFSSASTSSPSSISSSISSSSTILS-SPTPSTSSLMISSSSIISGSSSILSSSIS- 655
Query: 406 TTSSAATLSPTFLSNLTSPSETESGKLGVVTSCS 305
T +++LS S + S S S ++ S S
Sbjct: 656 TIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSS 689
>SPCC1840.09 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 29.9 bits (64), Expect = 0.31
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 532 ISNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSA 392
ISNL S + + P YN P+ GA+ + +S SI+R TS A
Sbjct: 183 ISNLRS----IFLRPGFMYNFNDRPFTGALASLFTVSSSINRATSGA 225
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.31
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 517 SFCPALTVSPSLTYNSLMTPWPGAM--TGMAVLSVSISRTTSSAATLS 380
SF + V+ +L YN P P A+ G V +VS S TSS TL+
Sbjct: 4 SFILSTLVAGALAYNEFSAPGPNAVLQEGGGVNTVSWSNLTSSTVTLT 51
Score = 26.2 bits (55), Expect = 3.8
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 511 CPALTVSPS-LTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETES 335
C T+S S L+Y+ ++ A + + + S TSS++T S + S+ +SPS + S
Sbjct: 111 CSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSS 170
Query: 334 GKLGVVTSCSTS 299
S S+S
Sbjct: 171 KSSSSSKSSSSS 182
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 29.1 bits (62), Expect = 0.53
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 203 QNTCTLTRNQTEPTESSGRPQSSSIHP 283
+NT ++ R +T PT+SSG ++ HP
Sbjct: 106 ENTSSVKRQKTLPTQSSGEEEAKYSHP 132
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 28.7 bits (61), Expect = 0.71
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 372 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKL 518
+ G+ + A E E+E K +P++A GV+ +L + G ++ AG L
Sbjct: 727 ETGEHIKAGEAYAEVEVMKMIMPLVATEDGVV-QLIKQPGASLDAGDIL 774
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +2
Query: 98 VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSS 271
V ++ N+ L ++ +VP+ HP+ +N S + + + P +S Q+S
Sbjct: 349 VTTVPSNSPATLNSYTTSVPSGMSRHPMLMNPSTPEPSLGVNSPSLRPLQSLNNVQNS 406
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 2.2
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +3
Query: 291 NPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIK 470
N LL++ PS P + L +V + + +L I ++ H K
Sbjct: 28 NQLLIDMGFIQPSMPGIFQY--LPLGLRVQNKICD---LLHISMRSLGASAISLAHLSSK 82
Query: 471 ELYVKDGETVKAGQKLFRL 527
E++ K G K G +LFRL
Sbjct: 83 EIWEKSGRWQKTGSELFRL 101
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 436 MAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGK 329
+ V + T S A ++ FLSNL S +TES +
Sbjct: 119 LQVTKAQTNSATGSEALMAKNFLSNLASRIQTESAQ 154
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 101 RSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 280
R+ E+ T L+ A+P S PV P+ QN+ ++ P E G + SIH
Sbjct: 417 RAPEESPMTFLQKKMAALPTSSPVRPMLKPTLQLQNS---PLSKLVPQE-VGNKVNDSIH 472
Query: 281 PLHESPA 301
P+
Sbjct: 473 TTSNQPS 479
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 237 NQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAADE 401
+QP L + + +++ QD+ P+FPDS E D VG S++ +E
Sbjct: 298 DQPACLAFACSLTHANSKRSIMLPQDID-PTFPDSEPEDDGHASSTVG-SLSKEE 350
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 130 ARSTSRRCTGVRASPSASSQQLKRPKYLHP-YTQPN 234
A +S T ASP+ +Q +P Y P Y+QP+
Sbjct: 71 AGGSSTGSTPRTASPAVGNQDYSKPSYSQPSYSQPS 106
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 131 LEAHPDAVPASG-PVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 280
++A ++P SG + P++ N+S++ + + N TESS RP SS ++
Sbjct: 145 MQASVHSLPLSGCSIGPVRTNHSSSLSNSS---NSLLQTESSLRPNSSFVN 192
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 5.0
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -2
Query: 529 SNLNSFCPALTVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSP 350
++L SF L + S Y+S +P ++ SV S TSS+ + S + S+ +
Sbjct: 488 ASLTSFGNFLGTATS--YSSASASYPSTSMSASLSSVHTSSATSSSKSSSSS--SSRSGS 543
Query: 349 SETESGKLGVVTSCSTS 299
S + S + G +S +S
Sbjct: 544 SSSSSSRSGSTSSSGSS 560
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = +2
Query: 104 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 283
S + N TT A P N++ Q+T TRN T S+G +
Sbjct: 143 STTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAATSNGTGTGAGTGA 202
Query: 284 LHES 295
H S
Sbjct: 203 SHRS 206
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 6.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 113 ENATTLLEAHPDA--VPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIH 280
E AT+ LE ++ P P + +NS N T PT S+G P +S+H
Sbjct: 22 EAATSRLEDLVESGHKPLPNMHRPSRDSNSQTHNISFNIGTPTAPTVSTGSPAVASLH 79
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 6.6
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = -2
Query: 418 SISRTTSSAAT-LSPTFLSNLTSPSETE--SGKLGVVTSCSTS 299
S S T+S+++T +S ++ S+ T PS++ S +GVV CS +
Sbjct: 208 SSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSVA 250
>SPAC1F5.05c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 151
Score = 25.4 bits (53), Expect = 6.6
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 161 SGPVHPLQVNNSN-AQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDHSKFPG 337
+GP P+ +N SN A + + P S S+S PL P+ + HS F
Sbjct: 58 TGPTSPVSINASNAAPSNLKASYIPANPRRLSSSTSSASSPPLRRLPSVQ----HSTFDD 113
Query: 338 L 340
L
Sbjct: 114 L 114
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 110 SENATTLLEAHPDAVPASGPVHP 178
S+ A L+E + DAVPAS P
Sbjct: 924 SDKAPDLIELNRDAVPASADTEP 946
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -2
Query: 496 VSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNLTSPSETESGKLGVV 317
+ P +++N + P + S+S + TSS T SP N ++PS++ + +
Sbjct: 158 LQPLISFNLDLFPKFSKQQQIESSSISKNLNTSSFNTRSPLRNHNFSNPSKSSKNGVHTI 217
Query: 316 TSCSTS 299
+ +S
Sbjct: 218 NNMQSS 223
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.0 bits (52), Expect = 8.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 568 SVAAAFLGASPVISNLNSFC--PALTVSPSLT-YNSLMTPWPGAMTGMA 431
+++ +F G S +SNL+++C L P T Y ++ T G TG++
Sbjct: 149 TISVSFGGVSKAVSNLHAYCSQSGLYRKPLTTNYLTVNTSVSGICTGIS 197
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 8.7
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 571 ASVAAAFLGASPVISNLNSFCPALTVSPSLTYNSLMTPW-PGAMTGMAVLSVSISRTTSS 395
AS ++ +SP++S S + ++ P+ + +TP P + + + + + +TS
Sbjct: 374 ASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSV 433
Query: 394 AATLSPTFLSNLTSPSETESGKLGVVTSCSTS 299
T +P + L + + T S + ++ TS
Sbjct: 434 PYTSTPVTSTPLATTNCTTSTSVPYTSTPVTS 465
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,426,897
Number of Sequences: 5004
Number of extensions: 50748
Number of successful extensions: 192
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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