Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30269
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    24   4.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   7.8  

>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 393 RLRCLPLSYLI*RHLQKRSPGN 328
           R+RC PL YL  R L +   GN
Sbjct: 123 RMRCSPLPYLFNRCLMEVGIGN 144


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 442 SWRPAMVSSRSCTSKTEKPLKLDKSCLG*RSQG 540
           SW  + +S+RSC  KT   L  +  C     QG
Sbjct: 643 SWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQG 675


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +2

Query: 71  KRQRQNKR*VRSISENATT-LLEAHPDAVPASGPVHPLQVNNSNA--QNTCTLTRNQTEP 241
           KR   +++   S SE ++T +L      +PAS  ++P+++  ++   +   T   N+ EP
Sbjct: 428 KRLSHDRKPSYSSSERSSTGILGGTAAYLPAS--INPVKLRETSTIRRQRRTALGNRDEP 485

Query: 242 TESSGRPQSSS 274
             SSG   +SS
Sbjct: 486 HSSSGNWSASS 496


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +2

Query: 71  KRQRQNKR*VRSISENATT-LLEAHPDAVPASGPVHPLQVNNSNA--QNTCTLTRNQTEP 241
           KR   +++   S SE ++T +L      +PAS  ++P+++  ++   +   T   N+ EP
Sbjct: 429 KRLSHDRKPSYSSSERSSTGILGGTAAYLPAS--INPVKLRETSTIRRQRRTALGNRDEP 486

Query: 242 TESSGRPQSSS 274
             SSG   +SS
Sbjct: 487 HSSSGNWSASS 497


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,456
Number of Sequences: 2352
Number of extensions: 12219
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)