Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30269
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 64 5e-11
At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein ... 58 3e-09
At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein ... 58 3e-09
At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein ... 56 2e-08
At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase, p... 49 3e-06
At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p... 42 3e-04
At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, p... 39 0.003
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 35 0.049
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 35 0.049
At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP... 34 0.086
At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L... 33 0.11
At1g36180.1 68414.m04497 acetyl-CoA carboxylase 2 (ACC2) nearly ... 33 0.20
At1g36160.1 68414.m04495 acetyl-CoA carboxylase 1 (ACC1) nearly ... 33 0.20
At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase, p... 30 1.1
At5g64380.1 68418.m08087 fructose-1,6-bisphosphatase family prot... 29 1.9
At5g56320.1 68418.m07029 expansin, putative (EXP14) similar to a... 29 3.2
At2g25180.1 68415.m03011 two-component responsive regulator fami... 29 3.2
At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP... 28 5.7
At5g06800.1 68418.m00768 myb family transcription factor contain... 28 5.7
At4g00440.1 68417.m00061 expressed protein 27 7.5
At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17 si... 27 9.9
At5g39785.2 68418.m04819 expressed protein 27 9.9
At5g39785.1 68418.m04818 expressed protein 27 9.9
At5g24800.1 68418.m02928 bZIP transcription factor family protei... 27 9.9
At2g36720.1 68415.m04505 PHD finger transcription factor, putative 27 9.9
>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
similar to SP|Q01205 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 312 DVTTPSFPDSVSEGDVKLD-KKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 488
+ P +S+++G + KK GD V ADE + +IETDK I + +P GVI+E VK+
Sbjct: 95 EAVVPHMGESITDGTLAAFLKKPGDRVEADEAIAQIETDKVTIDIASPASGVIQEFLVKE 154
Query: 489 GETVKAGQKLFRL 527
G+TV+ G K+ R+
Sbjct: 155 GDTVEPGNKVARI 167
>At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 463
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 312 DVTTPSFPDSVSEGDVKLD-KKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 488
+ P +S+++G + KK G+ V ADE + +IETDK I + +P GVI+E V +
Sbjct: 93 EAVVPHMGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVNE 152
Query: 489 GETVKAGQKL 518
G+TV+ G K+
Sbjct: 153 GDTVEPGTKV 162
>At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 312 DVTTPSFPDSVSEGDVKLD-KKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 488
+ P +S+++G + KK G+ V ADE + +IETDK I + +P GVI+E V +
Sbjct: 94 EAVVPHMGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVNE 153
Query: 489 GETVKAGQKL 518
G+TV+ G K+
Sbjct: 154 GDTVEPGTKV 163
>At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 365
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 336 DSVSEGDVKLD-KKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQ 512
+S+++G + KK G+ V ADE + +IETDK I + +P GVI+E V +G+TV+ G
Sbjct: 3 ESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVNEGDTVEPGT 62
Query: 513 KL 518
K+
Sbjct: 63 KV 64
>At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
[Zea mays] GI:5669871; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +3
Query: 186 STTQTPKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDV-K 362
STT T K+ +P+ KL + V ++ L Q++ PS +++EG++ +
Sbjct: 72 STTST-KLSSPMAGPKLFKEFISSQMRSVRGFSSSSDLPPHQEIGMPSLSPTMTEGNIAR 130
Query: 363 LDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG-ETVKAGQ 512
KK GD VA EV+ E+ETDK + + G + ++ ++G + ++ G+
Sbjct: 131 WLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKEEGAKEIQVGE 181
>At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
GI:5669871 [Zea mays]; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 309 QDVTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVK 485
Q++ PS +++EG++ + KK GD VA EV+ E+ETDK + + G + ++
Sbjct: 112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKA 171
Query: 486 DG-ETVKAGQ 512
+G + ++ G+
Sbjct: 172 EGSKEIQVGE 181
>At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide acetyltransferase
(E2) subunit of PDC [Arabidopsis thaliana] GI:559395;
contains Pfam profiles PF00198: 2-oxo acid
dehydrogenases acyltransferase (catalytic domain),
PF00364: Biotin-requiring enzyme, PF02817: e3 binding
domain; supporting cDNA
gi|5881964|gb|AF066080.1|AF066080
Length = 637
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 324 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 491
P+ ++S G+V K KK GD V +V+ EIETDK + + G + ++ V +G
Sbjct: 91 PALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEG 147
Score = 35.1 bits (77), Expect = 0.037
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 324 PSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG 491
P+ ++++G++ K KK GD + +V+ EIETDK + + G + ++ + +G
Sbjct: 218 PALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEG 274
>At3g06850.2 68416.m00813 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 34.7 bits (76), Expect = 0.049
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 312 DVTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 488
DV + ++E ++ K K GDSV + + E+++DK I + + G + +
Sbjct: 77 DVPLAQTGEGIAECELLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSP 136
Query: 489 GETVKAGQKLFRLEI 533
G+ +K G+ L RL +
Sbjct: 137 GDIIKVGETLVRLAV 151
>At3g06850.1 68416.m00812 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 34.7 bits (76), Expect = 0.049
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 312 DVTTPSFPDSVSEGDV-KLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKD 488
DV + ++E ++ K K GDSV + + E+++DK I + + G + +
Sbjct: 77 DVPLAQTGEGIAECELLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSP 136
Query: 489 GETVKAGQKLFRLEI 533
G+ +K G+ L RL +
Sbjct: 137 GDIIKVGETLVRLAV 151
>At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP2)
identical to biotin carboxyl carrier protein isoform 2
[Arabidopsis thaliana] gi|8886869|gb|AAF80592
Length = 255
Score = 33.9 bits (74), Expect = 0.086
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 372 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLF 521
KVGD V ++V IE K + A G I EL +DG+ V LF
Sbjct: 202 KVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLF 251
>At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase
(LTA2) identical to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963
Length = 480
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 309 QDVTTPSFPDSVSEGD-VKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVK 485
+++ P+ +++EG V K G+ +A E V+ +E+DK + V G + + V
Sbjct: 56 REIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADMDVETFYDGYLAAIVVG 115
Query: 486 DGETVKAG 509
+GET G
Sbjct: 116 EGETAPVG 123
>At1g36180.1 68414.m04497 acetyl-CoA carboxylase 2 (ACC2) nearly
identical to acetyl-CoA carboxylase 2 (ACC2)
[Arabidopsis thaliana] GI:11869928
Length = 1755
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 384 SVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEI 533
S+ D E+E K +P+++P GVI + +G+ ++AG+ + +L++
Sbjct: 199 SIDTDTPYAEVEVMKMCMPLISPASGVI-HFKLSEGQAMQAGELIAKLDL 247
>At1g36160.1 68414.m04495 acetyl-CoA carboxylase 1 (ACC1) nearly
identical to acetyl-CoA carboxylase 1 (ACC1)
[Arabidopsis thaliana] GI:11869927
Length = 2247
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 384 SVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLFRLEI 533
++ AD E+E K +P+++P GVI + +G+ ++AG+ + L++
Sbjct: 697 NIDADTPYAEVEVMKMCMPLLSPASGVI-HFKMSEGQAMQAGELIANLDL 745
>At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963; contains Pfam
profiles PF00198: 2-oxo acid dehydrogenases
acyltransferase (catalytic domain), PF00364:
Biotin-requiring enzyme, PF02817: e3 binding domain
Length = 465
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 309 QDVTTPSFPDSVSEGD-VKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVK 485
+++ P+ +++EG V K GD + E V+ +E+DK + V G + + V+
Sbjct: 40 REIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVE 99
Query: 486 DGETVKAGQKLFRLEIT 536
+G G + L T
Sbjct: 100 EGGVAPVGSAIALLAET 116
>At5g64380.1 68418.m08087 fructose-1,6-bisphosphatase family protein
similar to SP|P22418 Fructose-1,6-bisphosphatase,
chloroplast precursor (EC 3.1.3.11)
(D-fructose-1,6-bisphosphate 1-phosphohydrolase)
(FBPase) {Spinacia oleracea}; contains Pfam profile
PF00316: fructose-1,6-bisphosphatase
Length = 404
Score = 29.5 bits (63), Expect = 1.9
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +3
Query: 135 KHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTNPL--LVE 308
K+I T+ + +GQ+ + S ++A LH T L A+ + + ++ NPL LVE
Sbjct: 291 KYIDTVRQGKGQNPKKYSARYICSLVADLHRTLLYGGVAMNPRDHLRLVYEGNPLAFLVE 350
Query: 309 Q--DVTTPSFPDSVSEGDVKLDKKVGDSVAADEVVLEIETDKTAIPVMAPGHGV 464
Q ++ +S VKL +++ + + E V E+E+ + PG+ V
Sbjct: 351 QAGGKSSDGKRGILSIQPVKLHQRLPLFLGSLEDVAELESYGDVQQTVNPGYEV 404
>At5g56320.1 68418.m07029 expansin, putative (EXP14) similar to
alpha-expansin 3 GI:6942322 from [Triphysaria
versicolor]; alpha-expansin gene family, PMID:11641069
Length = 255
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 78 SVKIKGKYVQ*AKMLRRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLN 239
SV IKG + M R ++ Q+ + GQ++ FK TT + + +AT N
Sbjct: 186 SVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRN 239
>At2g25180.1 68415.m03011 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 596
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = +2
Query: 104 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 283
S N +LE HP A P P H + + N + + + P +S +S H
Sbjct: 403 SAPNNNVVVLEGHPQATPPGFPGHQINKRLEHWSNAVSSSTHPPPPAHNS----NSINHQ 458
Query: 284 LHESPACRARCD 319
SP +R D
Sbjct: 459 FDVSPLPHSRPD 470
>At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP1)
identical to biotin carboxyl carrier protein of
acetyl-CoA carboxylase precursor [Arabidopsis thaliana]
gi|9759121|dbj|BAB09606
Length = 280
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 372 KVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGETVKAGQKLF 521
KVGD V +V+ +E K + + G + ++ +DG+ V LF
Sbjct: 227 KVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLF 276
>At5g06800.1 68418.m00768 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 375
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 221 TRNQTEPTE-SSGRPQSSSIHPLHESPACRARCDHS 325
T NQ+ P + SS +P SS HP H + D S
Sbjct: 59 TANQSFPVQCSSSKPYPSSFHPYHHQSSDSPSLDQS 94
>At4g00440.1 68417.m00061 expressed protein
Length = 831
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 201 PKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDV-KLDKKV 377
P+ L+PL++ ++ AH + AS F N + ++++ T S P+ ++ V L K+
Sbjct: 431 PEYLSPLNSPGRRWEKSSTAHKKSASADFINLVNIKKE-THASQPEENTDIQVCNLSKEP 489
Query: 378 GDSV 389
DS+
Sbjct: 490 DDSI 493
>At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17
similar to beta-1,3-glucanase GI:6714534 from [Salix
gilgiana]
Length = 380
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/79 (22%), Positives = 30/79 (37%)
Frame = +2
Query: 65 TTKRQRQNKR*VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPT 244
TT R+N R + ++S TT P P + P+H + + + P
Sbjct: 203 TTTMTRRNLRSLVNLSSKFTTSFPTLPSPSPETSPIHS-SIGSPSPPTIPYFPEPSQSPM 261
Query: 245 ESSGRPQSSSIHPLHESPA 301
ES+ P H +P+
Sbjct: 262 ESNQGISLPPCLPYHPAPS 280
>At5g39785.2 68418.m04819 expressed protein
Length = 607
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 117 MLRRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTN 293
++RR KH + + Q + F S + L+ +KL + + HN++ I+F N
Sbjct: 536 IIRRFQKHKEE-DSTEDQVLHFFSQVDMKLVTRVLNMSKLTRDHLVWCHNKLTKINFVN 593
>At5g39785.1 68418.m04818 expressed protein
Length = 606
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 117 MLRRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTN 293
++RR KH + + Q + F S + L+ +KL + + HN++ I+F N
Sbjct: 535 IIRRFQKHKEE-DSTEDQVLHFFSQVDMKLVTRVLNMSKLTRDHLVWCHNKLTKINFVN 592
>At5g24800.1 68418.m02928 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H2
GI:10954096
Length = 277
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 200 AQNTCTLTRNQTEPTESSGRPQSSSIHPLH----ESPACRARCDHSKFPGL 340
A+ + T + NQ T S P S SI LH SPA D S FPG+
Sbjct: 202 ARGSLTSSLNQLLQTHLS--PPSHSISSLHYTGNTSPAITVHSDQSLFPGM 250
>At2g36720.1 68415.m04505 PHD finger transcription factor, putative
Length = 1007
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -2
Query: 499 TVSPSLTYNSLMTPWPGAMTGMAVLSVSISRTTSSAATLSPTFLSNL 359
T SL T P +T + I+R S + ++SP F+S+L
Sbjct: 402 TSQASLAATRTSTSAPACITSPVKSRLKITRKPSESTSISPVFMSSL 448
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,908,230
Number of Sequences: 28952
Number of extensions: 279012
Number of successful extensions: 1022
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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