Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30268
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.3  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    24   4.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   5.8  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 479 QRISSHEISSPSIYLQKECHQ*AQECIEWC 390
           ++ S HE+         ECH+   EC E C
Sbjct: 447 KKSSDHEVMVQKNRNATECHEEGMECSEQC 476


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 246 YDCQLI*VWRISLARICRTLVAAIMSIFSSPSV 148
           + C L  +W++     CR +  A+    S PSV
Sbjct: 4   FRCSLRRMWKLRFGYACRRVADAMRLCVSEPSV 36


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 516 RFSKFRKGCQTLPENFV 466
           +F + R+GC TLP   V
Sbjct: 401 QFVRIRRGCNTLPNEMV 417


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 482 NVWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMDK 595
           N+ + F      +  F + MT   +  + CW PQ++ K
Sbjct: 314 NIIRMFNEPTTEEIRFAKLMTVLSVFFIICWLPQMVSK 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,012
Number of Sequences: 2352
Number of extensions: 15383
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)