Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30267
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical... 30 1.5
AC024746-8|AAF60397.1| 104|Caenorhabditis elegans Hypothetical ... 29 2.6
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 6.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 6.0
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 28 6.0
Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical p... 28 7.9
Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 28 7.9
>AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical
protein Y39G10AR.7 protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 433 CNSTRKGSCLDRKKYYPDKCMWF 365
CN RKG C+D KK + WF
Sbjct: 256 CNIFRKGECIDEKKERQNMIQWF 278
>AC024746-8|AAF60397.1| 104|Caenorhabditis elegans Hypothetical
protein Y110A2AL.9 protein.
Length = 104
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 547 LASNGTYVQYEYTC-PTTSVFNPNTRVCTTSYTWYNNL 657
L G + Y Y C T VF+P T C T Y + N++
Sbjct: 37 LCRPGYTLMYGYRCCATKDVFDPTTATCYTGYGYSNSV 74
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Frame = +1
Query: 166 LFYNYQCPSTSVFNPNTAMCTDPXXXXXXXXXXXXXXXXED--GYIADPSSTNCSSYIEC 339
LF + C S+ FN T C P + +IAD + NC + C
Sbjct: 1207 LFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSEHGSFIAD--ANNCEVFYRC 1264
Query: 340 VGINGTFTETTYTCPDNTFYDP 405
V + TCP T ++P
Sbjct: 1265 V----WGRKVVMTCPSGTVFNP 1282
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +2
Query: 65 STVRRPEQADLPMTMTRLVKTTRF--ASTILRL*IICSTTINVHRRPCSIRTLQCVPILP 238
ST+ P +P T T + TT A+ T P ++ T P+ P
Sbjct: 476 STMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNP 535
Query: 239 TTYAM*RPQILPFVPKTGTSPIRAPQIVPVTS 334
T+ P P TSP AP + PVT+
Sbjct: 536 TSSTT-----APTAPVNPTSPTTAPTVPPVTT 562
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 61 AVNCTQTGAGRFADDDDTTCQNYTLCVYDTSTLDYLFYNYQCPSTSVFNPNTAMCTDP 234
A CT+ G D C + CV S YN++CP+ F+ +T MC P
Sbjct: 563 AFKCTKDGFFGVPSD----CLKFIRCVNGIS------YNFECPNGLSFHADTMMCDRP 610
>Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 583 TCPTTSVFNPNT----RVCTTSYTW 645
TCP NP T +C TSYTW
Sbjct: 166 TCPPKQCANPQTDELKHLCNTSYTW 190
>Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 583 TCPTTSVFNPNT----RVCTTSYTW 645
TCP NP T +C TSYTW
Sbjct: 166 TCPPKQCANPQTDELKHLCNTSYTW 190
>Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 583 TCPTTSVFNPNT----RVCTTSYTW 645
TCP NP T +C TSYTW
Sbjct: 166 TCPPKQCANPQTDELKHLCNTSYTW 190
>Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 583 TCPTTSVFNPNT----RVCTTSYTW 645
TCP NP T +C TSYTW
Sbjct: 166 TCPPKQCANPQTDELKHLCNTSYTW 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,954,914
Number of Sequences: 27780
Number of extensions: 379012
Number of successful extensions: 1154
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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