Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30266
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 44 2e-05
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 37 0.003
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 35 0.008
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 35 0.011
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 35 0.011
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 33 0.013
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 33 0.045
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 32 0.059
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 31 0.10
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 31 0.10
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 31 0.10
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 30 0.32
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 30 0.32
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 29 0.73
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 28 1.3
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 27 3.0
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 27 3.0
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 3.9
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 26 3.9
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 5.2
SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyc... 26 5.2
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 26 5.2
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 6.8
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 25 6.8
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 25 9.0
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 25 9.0
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 25 9.0
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 44.0 bits (99), Expect = 2e-05
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = +2
Query: 134 SGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQ 313
+ FY GY + P L +++ TL + L+ MT V G LRVL
Sbjct: 107 TAFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWGFLLCMTSVANYPG----FIALRVLL 162
Query: 314 GMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMS 451
GM E P +++ A+W E+ + ++ +G I GS M+
Sbjct: 163 GMMESAASPGFILLTAQWYKRSEQQLRTSVWVAFNGLGQILGSCMA 208
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 36.7 bits (81), Expect = 0.003
Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Frame = +2
Query: 140 FYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGM 319
F GY I +PG Y ++ + + ++ LMT L ILR +
Sbjct: 76 FTCGYIIGQLPGSYALQRVPARLWFSV---MNILWGLMTIFSFAVHSVRALMILRFFMAV 132
Query: 320 GEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFL---MAGDG---DW 481
E T +L W E ++ + +G +F ++ + + G G W
Sbjct: 133 AEASTFAGTHYILGAWYKESELCKRAGIFSASGLVGTMFAGYLQTAVHSSLNGKGGLSGW 192
Query: 482 ANVFYFFGCFGVPL 523
+F G +PL
Sbjct: 193 RWLFIIDGILTIPL 206
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 35.1 bits (77), Expect = 0.008
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 176 GYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIV 355
G L + YG K +G + I++L++ A + R L G+ +P + +
Sbjct: 103 GRLGDIYGHKKMFVLGYIWFCIWSLISGFSYYAKSVIMFDVCRALTGIAPAFLLPNALAL 162
Query: 356 LARWVPPHERSRQGALVFGG-AQIGNIFGSFMSG 454
L R PP ++ +FG A G + GS SG
Sbjct: 163 LGRVYPPGKKKNLIFALFGATAPNGFLLGSVFSG 196
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 34.7 bits (76), Expect = 0.011
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +2
Query: 122 GLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA-----GGAT 286
GL+ + G + G++ + +G K+ G ++ I T++ + K+ G
Sbjct: 91 GLVNAAANIGNVFGQILFGFMGDFFGRKFVYGKEMIVVIIATVLVIALPKSIPTPLGKMM 150
Query: 287 WLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMA 466
W+F R L G+G G P + + R ++VF G + G+ ++ L+A
Sbjct: 151 WIFAWRWLLGLGIGGDYPMSATITSERSLLSRRGTLLSIVFSFQGFGTLAGAIVTIILLA 210
Score = 29.1 bits (62), Expect = 0.55
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 374 PHERSRQGALVFGGAQIGNIFGSFMSGFL 460
PH S LV A IGN+FG + GF+
Sbjct: 83 PHYPSGIHGLVNAAANIGNVFGQILFGFM 111
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 34.7 bits (76), Expect = 0.011
Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 1/116 (0%)
Frame = +2
Query: 131 LSGFYYGYAITHVPGGYLAEKYGGK-WTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRV 307
L+ FY GY I VP + + W I L + + K G A LR
Sbjct: 133 LALFYVGYIIFEVPSNLMMAFIEPRIWVSRIQLTIGVVGACHAVLGTKHGNAQSYVALRF 192
Query: 308 LQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMAGDG 475
G+ E P L ++RW ++ + AQI S +S DG
Sbjct: 193 FLGVAESGLWPGLAYYMSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVSAGFQKMDG 248
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 32.7 bits (71), Expect(2) = 0.013
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +2
Query: 140 FYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGM 319
FY G+ I +PG L +++ + STA++T++ + A + L LR G+
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVA---ASTALWTIIIFLHCAAYNFSGLMALRFFLGL 189
Query: 320 GEGPTMPALMIVLARWVPPHERS 388
E +P + + + P E++
Sbjct: 190 VESSLLPTMEATIGMFFPHSEQA 212
Score = 20.6 bits (41), Expect(2) = 0.013
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +2
Query: 491 FYFFGCFGVPLVRGLEYTLLQYTKHS 568
F++ C+G + G +QY K++
Sbjct: 217 FFYISCYGCNIPAGFIAYGVQYAKNT 242
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 32.7 bits (71), Expect = 0.045
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +2
Query: 101 DWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMT-----PVV 265
D+ +G++ + G + + G+L + +G K+ G ++ I T++ +
Sbjct: 79 DYPSGIRGVVNAATNIGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPDRIP 138
Query: 266 VKAGGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSF 445
WLF RV+ G+G G P + + + R A +F G + G
Sbjct: 139 TPTAKMMWLFAFRVMLGIGIGGDYPMSASITSEQSLINRRGALLAWIFSNQGWGTLAGCV 198
Query: 446 MSGFLMA 466
+ ++A
Sbjct: 199 ATLIILA 205
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 32.3 bits (70), Expect = 0.059
Identities = 25/107 (23%), Positives = 45/107 (42%)
Frame = +2
Query: 176 GYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIV 355
G ++E G K L S +F + + A WL + R +QG+G G M + IV
Sbjct: 146 GIMSEVVGRKIVL---YTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGIMSLVTIV 202
Query: 356 LARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMAGDGDWANVFY 496
+A P R + + ++ G + G ++ + W +F+
Sbjct: 203 IADITPLQTRPYYTGCMGVTWGVASVMGPLIGG-AISQNTTWRWIFF 248
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 31.5 bits (68), Expect = 0.10
Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +2
Query: 119 QGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA-----GGA 283
+GL+ + G + G++ + +G K+ G ++ I T++ + K+
Sbjct: 95 RGLVNAASNIGNIFGQLMFGFMGDFFGRKFVYGKEMIIVIIATILLIAMPKSIHSPLSKM 154
Query: 284 TWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLM 463
W+F R L G+G G P + + + R +L+F G + G+ ++ L+
Sbjct: 155 MWVFCWRWLLGVGIGGDYPMSAAITSERSKLNRRGTLISLIFAFQGFGTLAGAIVTIILL 214
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 377 HERSRQGALVFGGAQIGNIFGSFMSGFL 460
H S LV + IGNIFG M GF+
Sbjct: 89 HYPSGIRGLVNAASNIGNIFGQLMFGFM 116
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 31.5 bits (68), Expect = 0.10
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 71 LTYMT*YAIFDWSESTQGL---ILSGFYYGYAITHVPGGYLAEKYG-GKWTLGIGLLSTA 238
L+Y T +FD T + + FY GY + PG Y+ + + GK+ +G+ S +
Sbjct: 120 LSYSTILGLFDDVHITSNQYNNLNTLFYVGYIVGQFPGHYIMQTFPLGKF-VGLVTFSWS 178
Query: 239 IFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERS 388
+ + GG L LR G E +PA+ + + E++
Sbjct: 179 VIVFLHCCAYNYGG---LIALRFFLGFTESCLLPAMEATMGMFFTHQEQA 225
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 31.5 bits (68), Expect = 0.10
Identities = 24/107 (22%), Positives = 44/107 (41%)
Frame = +2
Query: 131 LSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVL 310
+S FY Y + P L ++ L + ++ L + + GG L R++
Sbjct: 102 VSIFYVLYILVETPSVVLVKRIKASRMLAFISFAWSMTVLFSGFMSSYGG---LIATRLI 158
Query: 311 QGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMS 451
G+ EG PAL + L E+ ++ + +F A + FG +
Sbjct: 159 LGLLEGCLFPALNLYLTTHYTRKEQCQRLSYLFASAGLAGAFGGLFA 205
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 29.9 bits (64), Expect = 0.32
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Frame = +2
Query: 119 QGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA-----GGA 283
+GL+ + G + G++ + +G K+ G ++ I T++ + K+
Sbjct: 95 RGLVNASANIGNIFGQLLFGFMGDFFGRKFVYGKEMVIVIIATVLVIAMPKSIHSPLSKM 154
Query: 284 TWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLM 463
W+F R L G+G G P + + R +L+F G + G+ ++ L+
Sbjct: 155 MWVFCWRWLLGVGIGGDYPMSAAITSERSKIKRRGTLISLIFAFQGFGTLAGAIVTIILL 214
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 377 HERSRQGALVFGGAQIGNIFGSFMSGFL 460
H S LV A IGNIFG + GF+
Sbjct: 89 HYPSGIRGLVNASANIGNIFGQLLFGFM 116
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 29.9 bits (64), Expect = 0.32
Identities = 24/107 (22%), Positives = 43/107 (40%)
Frame = +2
Query: 176 GYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIV 355
G ++E G K L S +F + + A WL + R +QG+G G + IV
Sbjct: 146 GIMSEVVGRKIVL---YTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIV 202
Query: 356 LARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMAGDGDWANVFY 496
+A P R + + ++ G + G ++ W +F+
Sbjct: 203 IADITPLQTRPYYTGCMGVTWGLASVMGPLIGG-AISQKASWRWIFF 248
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 28.7 bits (61), Expect = 0.73
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Frame = +2
Query: 113 STQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWL 292
+T L +S F GY + + ++E G K L IGL ++F + V A +
Sbjct: 174 TTSLLNVSLFMLGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQI---AVATAQDIQTI 230
Query: 293 FILRVLQGMGEGPTMPALMIVLARWVPPHERSRQ----GALVFGGAQIGNIFGSFMS 451
I R G G + + A P R A++F G + I G F++
Sbjct: 231 MICRFFGGYGACVPLCVVAAAFADMYPNRYRGTAITIFAAVIFVGPLVAPIVGGFLT 287
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 27.9 bits (59), Expect = 1.3
Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
Frame = +2
Query: 95 IFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA 274
IF S + L ++ F GY + L+E G K L IG+ IF + V A
Sbjct: 164 IFHISLTVSLLTMTVFLCGYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAV---A 220
Query: 275 GGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQ----GALVFGGAQIGNIFGS 442
+ + R G + + A R ALVF G + I G
Sbjct: 221 KDIQTIMMCRFFSGFFASAPLTVVAAAFADMYSNKHRGTAITIFAALVFDGPLVSPIIGG 280
Query: 443 FMS 451
F++
Sbjct: 281 FLT 283
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 377 HERSRQGALVFGGAQIGNIFGSFMSGFLMAGDGDWANVFYF 499
+ +RQG L+ G +G+ FG F+S LM G ++ ++
Sbjct: 53 YSSARQG-LITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFW 92
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/70 (20%), Positives = 29/70 (41%)
Frame = +2
Query: 287 WLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMA 466
WL + R +QG+G G + + I+++ P R ++ + G + G +
Sbjct: 186 WLIVCRAIQGLGGGGIISLVNIIISDITPLRTRPMYSGILATAWGAALVAGPIIGGAICQ 245
Query: 467 GDGDWANVFY 496
W +F+
Sbjct: 246 RT-TWRWIFF 254
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 244 EDSCTQKTYSQSPFPSVFFRQVSPRDMSYSVSIVKPA 134
E+S TQ + + P P+ +V+P S S+S +P+
Sbjct: 412 ENSQTQSSTPRKPLPTTTSPKVNPEPHSESISDTRPS 448
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 182 LAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGG-ATWLFILR 304
+ + Y T+ +G + T + TL+TP KAG +++F+++
Sbjct: 626 ITDSYINHLTIFMGYIETVLKTLLTPASPKAGFIQSYIFLVK 667
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 461 MAGDGDWANVFYFFGCFGVPLVRG-LEYTLL 550
+AG W++ FY F +PL+ G L +T L
Sbjct: 83 LAGVSSWSDFFYLFHFSDIPLIFGTLIFTCL 113
>SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 572
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 331 WTLTHSL*YSQNEQPSSSPSFHNY 260
WTL L Y+ N+Q + P + NY
Sbjct: 424 WTLGQVLLYASNQQLLAKPEYANY 447
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 381 SWGGTHRASTII-RAGIVGPSPIPCNTLKM 295
SW T R I R+GIV P PIP + L +
Sbjct: 486 SWDKTVRIWDIFSRSGIVEPLPIPSDVLSL 515
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.4 bits (53), Expect = 6.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 254 TPVVVKAGGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVF 409
T V V G T LF + G+G + A + LA ++ + RSR G F
Sbjct: 86 TAVGVTWGIITKLFATAANRNHGDGSPILATSLALASFISAYIRSRYGYRFF 137
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 191 KYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFI 298
+YG K +GIGLLS F T W I
Sbjct: 582 RYGLKMAIGIGLLSIVAFQKSTAARYTLWNGQWSLI 617
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 300 KMNSQVAPPAFTTTGVMSVK 241
K ++++A PAF TTG + +K
Sbjct: 712 KQHTEIAQPAFNTTGTVLMK 731
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 6.8
Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 2/108 (1%)
Frame = -1
Query: 531 PRTKGTPKHPKK*NTLAQSPSPAIKNPDMKEPNIFPICAPPKTKAPCRDRSWGGTHRAST 352
P G P PK P P++ P + P+ P P AP G
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 351 IIRAGIVGPSPIPCNTLKMNSQVAPPA-FTTTGVMSV-KIAVLRRPIP 214
+ A V P+P + S APP ++G+ V K A P+P
Sbjct: 1146 SVAAPPV-PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -1
Query: 504 PKK*NTLAQSPSPAIKNPDMKEPNIFPICAPPKTKAPCRDRS 379
P T +PS + + EPN P PP+ P R+
Sbjct: 559 PSNNKTEGYTPSVVREEKNYSEPNASPSVIPPRVPTPVPGRT 600
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 398 ALVFGGAQIGNIFGSFMSGFLMAGDGDWANVFYFFGCF 511
AL+ G G +FG+ +S G ++ +F GC+
Sbjct: 59 ALLTGTVNAGCLFGAMLSSPFTEAIGKKYSIAFFSGCY 96
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 25.0 bits (52), Expect = 9.0
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 4/123 (3%)
Frame = +2
Query: 95 IFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA 274
+F S + L ++ F GY + L+E G K + IG+L IF + V
Sbjct: 165 VFHISLTVSLLTMTVFLLGYCSGPIIWAPLSELSGRKPPILIGMLGFGIFNISVAV---G 221
Query: 275 GGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQ----GALVFGGAQIGNIFGS 442
+ + R G + + LA R A+VF G + I G
Sbjct: 222 KDIQTIMMCRFFAGFFASAPLTVVAAALADMYSNKYRGTAITLFSAMVFDGPLVSPIVGG 281
Query: 443 FMS 451
F++
Sbjct: 282 FLT 284
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 365 WVPPHERSRQGALVFGGAQIGN--IFGSFMSGFLMAGDGDWANVFYFFGCF 511
WV S G L F + + IFG F S + G +W N+ + C+
Sbjct: 383 WVGCLVTSSFGLLAFMNTKSSSATIFGYFSSAVTVFGTINWINILLSYICY 433
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,947,490
Number of Sequences: 5004
Number of extensions: 69056
Number of successful extensions: 241
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -