Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30266
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 106 1e-23
SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 89 3e-18
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 82 4e-16
SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 67 1e-11
SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 36 0.021
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073) 33 0.14
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 33 0.19
SB_52111| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_57766| Best HMM Match : MFS_1 (HMM E-Value=2.4e-14) 31 1.0
SB_58328| Best HMM Match : MFS_1 (HMM E-Value=0.072) 29 2.4
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_43178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_11398| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.82) 29 4.1
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 29 4.1
SB_21607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 28 5.4
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 28 5.4
SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28) 28 5.4
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_57125| Best HMM Match : HtpX_N (HMM E-Value=9.3) 28 7.2
SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062) 28 7.2
SB_14144| Best HMM Match : MFS_1 (HMM E-Value=0.047) 28 7.2
SB_1379| Best HMM Match : FHA (HMM E-Value=3.7e-18) 28 7.2
SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18) 27 9.5
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 27 9.5
SB_16641| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16)
Length = 432
Score = 106 bits (255), Expect = 1e-23
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +2
Query: 92 AIFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVK 271
A F+W + QGL+L F+YGY + +PG +LA + GG G G+ T++ L+TPV +
Sbjct: 159 AEFNWDSALQGLVLGSFFYGYWVLQIPGAWLAMRIGGTRVFGYGVFVTSLLALLTPVATR 218
Query: 272 AGGATW-LFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFM 448
+ W L +R+ QG+ G T P + ++W PP ERS + G GNI +
Sbjct: 219 Y--SVWGLVGVRIFQGLFLGVTFPCNHAIWSKWAPPFERSTLITISIAGCPFGNIVAIPL 276
Query: 449 SGFL--MAGDGDWANVFYFFGCFGV 517
+G L DG W +VFY FG G+
Sbjct: 277 TGLLSKYGFDGGWPSVFYCFGTSGI 301
>SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07)
Length = 349
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +2
Query: 98 FDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAG 277
F W + TQGL+L F+YGY +T +PGG+LA YGGK G+G+ TAIFTL+TP+ +
Sbjct: 99 FKWDQDTQGLVLGAFFYGYLVTQLPGGWLAGHYGGKSVFGLGVFFTAIFTLLTPIAARTH 158
Query: 278 GATWLFILRVLQGMGEGPTMPALMIV 355
A L +R++ G GE +P L I+
Sbjct: 159 VAL-LVAVRLMAGFGEKVPVPWLKIL 183
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 81.8 bits (193), Expect = 4e-16
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Frame = +2
Query: 104 WSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVK---A 274
W++ GL+LS F++GY IT +PGG+L++ YG + L + ++ TL+ P+V
Sbjct: 68 WNKRESGLVLSSFFWGYLITQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQKVT 127
Query: 275 GGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSG 454
T + I R+ G+ +G P+L +LA+ +P ERS A G +G++ +
Sbjct: 128 SPITLVLISRLALGVFQGIYYPSLYSLLAKSLPISERSSCSAFALAGGPVGSLVIGGLGS 187
Query: 455 FLMAGDGDWANVFYFFGCFGV 517
++A G W VF FG G+
Sbjct: 188 LVLARCG-WRWVFLSFGSIGL 207
>SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 71.7 bits (168), Expect = 4e-13
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Frame = +2
Query: 104 WSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVV-KA-- 274
W + G ++S F++GY + GGYL++KYGG+ LG + + TL P + KA
Sbjct: 56 WDKEADGAVMSAFFWGYTPAQIVGGYLSDKYGGEVVLGYAAIIWSFCTLAVPFLPGKAFL 115
Query: 275 --GGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGN-IFGSF 445
+ + RV+ G+ +G P+L ++A+ +P ER+ + VF +G + GS
Sbjct: 116 FFPPIVMVILSRVVTGLSQGLHYPSLTNIIAKRIPLKERTLLTSSVFSAGPVGTLVMGSV 175
Query: 446 MSGFLMAGDGDWANVFYFFGCFGV 517
S LM W +VF G G+
Sbjct: 176 GSVILMY--FGWPSVFLAQGAAGL 197
>SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 125 LILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILR 304
L+L FYYGYA+ +P G+ K GGK G G+L ++ L+TP +VK ++ LR
Sbjct: 2 LVLGSFYYGYAVLQIPAGWAVLKIGGKPIFGFGILVASVLALVTPPIVKQSFIVFI-CLR 60
Query: 305 VLQGMGEGPTMPALMIVLARWVPPHERS 388
+ QG+ G A + A W P ER+
Sbjct: 61 IAQGLSLGLIASAHHCIWATWSPIFERA 88
>SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26)
Length = 473
Score = 66.9 bits (156), Expect = 1e-11
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Frame = +2
Query: 113 STQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWL 292
+ +G++L FYYGY + GG+LA K G G +L ++ TL+TP+ + G L
Sbjct: 63 AVEGVVLGSFYYGYVALQLLGGWLAIKIGATRLYGAAILVASLLTLLTPLAAR-GSPYLL 121
Query: 293 FILRVLQGMGEGPTM--PALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFL-- 460
LR+L+G+ M A++ + E SR +G++ ++G L
Sbjct: 122 VALRMLEGLVLAARMLNAAILSAIMFEKVTVENSR--------CTVGSVATMPITGMLTK 173
Query: 461 MAGDGDWANVFYFFGCFGV 517
DG WA+VFY FG FGV
Sbjct: 174 YGFDGGWASVFYCFGAFGV 192
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 492 FISSDALVYLWFVAWSILCFSTPNTHP 572
F A LW++ W +L + TP+ HP
Sbjct: 184 FYCFGAFGVLWYIMWVLLAYETPSFHP 210
>SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +2
Query: 125 LILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILR 304
+IL FYYGY + +PGG+LA K GG G G+ S + TL TP+ + L ILR
Sbjct: 2 IILGSFYYGYMVFQIPGGWLAMKLGGAKLFGFGIFSASFLTLFTPLAARCSPIA-LIILR 60
Query: 305 VLQGM 319
VL+G+
Sbjct: 61 VLEGL 65
>SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 158 ITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVK 271
+T VPGG LA+++GG+ LG +L ++IF ++PV +
Sbjct: 2 LTQVPGGMLAQRFGGRVVLGSCMLFSSIFVFLSPVAAR 39
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 36.3 bits (80), Expect = 0.021
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Frame = +2
Query: 95 IFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA 274
+F S+ LI+SG + V GG L + G K L +L + +FT V+ A
Sbjct: 81 VFHLSDFWHELIVSGTIGTAIVGAVLGGILNDSLGRKPVL---VLCSGVFTAGAVVMGVA 137
Query: 275 GGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSR----QGALVFGGAQIGNIF-G 439
G L + R++ G+G G + I +A P R + + GG I ++ G
Sbjct: 138 GTKHVLLVGRLVIGLGIGGASMTVPIYVAEAAPSSMRGKLVTLNNLFITGGQFIASVVDG 197
Query: 440 SF----MSGF-LMAGDGDWANVFYFFGCFGVP 520
F +G+ M G ++ FFGC +P
Sbjct: 198 IFAYDRQNGWRFMLGLAAVPSIIMFFGCVILP 229
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 34.7 bits (76), Expect = 0.063
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 149 GYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEG 328
GY I V GG+L +K G +G+ L A+F+++ P+V G L + L +G G
Sbjct: 1078 GYLIGSVAGGWLYDKLDGYLVIGLVSLLGALFSIVMPLV---GNIYGLIFVACLASIGNG 1134
>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
Length = 582
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +2
Query: 134 SGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWL-FILRVL 310
S ++G+AI + G +A+KYG L + +L V KA WL +LR
Sbjct: 413 SMLFFGWAIGAIFLGIIADKYGRCSVLFPSAILVMGLSLAMAFVKKA----WLVLVLRFF 468
Query: 311 QGMGEGPTMPALMIVLARWVPPHERSRQGALVF 409
G EG ++ ++ V P +R+ G LV+
Sbjct: 469 IGFFEGGGFLSMFVLATELVGPAKRALAGTLVW 501
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 413 GAQIGNIFGSFMSGFLM--AGDGDWANVFYFFGCFGV 517
G +G I +SG L DG WA+VFY FG G+
Sbjct: 381 GCHVGTIITMPLSGLLTKYGFDGGWASVFYCFGAAGI 417
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 519 LWFVAWSILCFSTPNTHP 572
LWFVAW ++ +P+ HP
Sbjct: 418 LWFVAWQLIVHDSPDEHP 435
>SB_52111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 413 GAQIGNIFGSFMSGFLM--AGDGDWANVFYFFGCFGV 517
G +G +F ++G L DG W +VFY FG FG+
Sbjct: 16 GTSVGYLFTMPITGLLTKYGFDGGWGSVFYCFGVFGL 52
Score = 29.1 bits (62), Expect = 3.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 522 WFVAWSILCFSTPNTHP 572
W++AW +L + TP HP
Sbjct: 54 WYIAWLLLVYETPAEHP 70
>SB_57766| Best HMM Match : MFS_1 (HMM E-Value=2.4e-14)
Length = 499
Score = 30.7 bits (66), Expect = 1.0
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 2/129 (1%)
Frame = +2
Query: 125 LILSGFYYGYAITHVPGGYLAEKYGGKWT--LGIGLLSTAIFTLMTPVVVKAGGATWLFI 298
L+ GF G + V G L + W L + LST + + T +V + L
Sbjct: 312 LLYVGFGVGSTVGRVLIGRLCDL---PWVSPLYMYCLSTMVAGVSTLLVPQLDSFAGLIG 368
Query: 299 LRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMAGDGD 478
+ G G A+ +++ + P R++ L F + GS GFL G
Sbjct: 369 YFTVNGFANGGYATAVFMIVYQMTIPRMRTKALGLYFFVVSLAFASGSPFGGFLADSLGS 428
Query: 479 WANVFYFFG 505
+ VFY G
Sbjct: 429 YIVVFYVSG 437
>SB_58328| Best HMM Match : MFS_1 (HMM E-Value=0.072)
Length = 260
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +2
Query: 95 IFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA 274
+FDWS + ++ S Y +T + ++ + G + ++ + + T + V +
Sbjct: 72 VFDWSNTEIAVLASMDPITYLVTMLFFSWMMDVKGLRKSMLVSTAFMFVGTGLRCVTPDS 131
Query: 275 GGATWLFIL-RVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMS 451
A W ++L G+ T A ++ A W P H+R+ A+ +G + SF+
Sbjct: 132 TYAIWTMGGGQLLNGLAGPVTQAAPPLLSAAWFPSHQRTTATAVAALCGSLG-VAMSFVI 190
Query: 452 G 454
G
Sbjct: 191 G 191
>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +2
Query: 95 IFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKA 274
+FDWS + ++ S Y +T + ++ + G + ++ + + T + V +
Sbjct: 253 VFDWSNTEIAVLASMDPITYLVTMLFFSWMMDVKGLRKSMLVSTAFMFVGTGLRCVTPDS 312
Query: 275 GGATWLFIL-RVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMS 451
A W ++L G+ T A ++ A W P H+R+ A+ +G + SF+
Sbjct: 313 TYAIWTMGGGQLLNGLAGPVTQAAPPLLSAAWFPSHQRTTATAVAALCGSLG-VAMSFVI 371
Query: 452 G 454
G
Sbjct: 372 G 372
>SB_43178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 104 WSESTQGLILSGFY-YGYAITHVPGGYLAEKYGGKWT-LGIGLLS--TAIFTLMTPVV 265
W+ + QG++ S +G+ I + GG+L YG + T L G L+ AIF++ V+
Sbjct: 409 WAATVQGIVQSLLEGFGFGIGPIIGGFLVADYGIRATFLIFGALAAGVAIFSVTAHVI 466
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -1
Query: 444 KEPNIFPICAPPKTKAPCRD--RSWGGTHRASTIIRAGIVGPSPIPCNTLKMNSQVAPPA 271
K IFP+ A +T +P + ST I A + SP +T++ PP
Sbjct: 883 KPRTIFPVAASSRTISPVETTPETIPPVETKSTTISA--IESSPRTASTVETTPWTTPPV 940
Query: 270 FTTTGVMS 247
TTTG S
Sbjct: 941 KTTTGTRS 948
>SB_11398| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=0.82)
Length = 439
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 292 QPSSSPSFHNYGRHEREDSCTQKTYSQSPFPSVFFRQVSPR 170
+PS PSF ++ + E +DS T K +PF + + P+
Sbjct: 275 KPSKKPSFSSFSKPENQDSLT-KDEDDNPFVGIAPSPLKPK 314
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 116 TQGLILSGFYYGYAITHVPG-GYLAEKYGGK 205
T L+ G ++ +TH+PG GY+A + G+
Sbjct: 955 TGALVTMGMFFQVQVTHLPGSGYIARRLKGR 985
>SB_21607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -3
Query: 346 QSRHCWTLTHSL*YSQNEQPSSSPSFHNYGRHEREDSCTQKTYSQSPFPSVFFRQVSPRD 167
Q+R C L +S + Q + + NYG TQ T S P R V+P++
Sbjct: 20 QTRCCLLLLNSCHWGLGRQDDTQEAHENYGDPPPTYDATQTTSLASQGPQTSERSVAPQE 79
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -1
Query: 534 KPRTKGTPKHPKK*NTLAQSPSPAIKNPDMKEPNI-FPICAPPKTKAP 394
+P + TPK P+ +P P P PN P+ PP T+ P
Sbjct: 13 RPVDQATPKPPQPTPPKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPP 60
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -1
Query: 387 DRSWGGTHRASTIIRAGIVGPSPIPCNTLKMNSQVAPPAFTTTGVMSVKIAVLRRPIPKV 208
+RS GTH S+ + G S P +L +N++ + + T V + + RP+
Sbjct: 417 NRSLSGTHGTSSHSSSSFHGASSQPAGSLSVNARSSSSSHVTGPVSQSQASRRNRPLFSS 476
Query: 207 HFPP 196
PP
Sbjct: 477 GNPP 480
>SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28)
Length = 834
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 546 RVYSKPRT-KGTPKHPKK*NTLAQSPSPAIKNPDMKEPNIFPICAPPKTKAPCR 388
R KP++ K TP K T ++ PSP P ++ P + P+T P R
Sbjct: 503 RKEKKPQSEKKTPSETKSALTSSKKPSPLATKPPSSAGHVNPPPSRPQTHHPSR 556
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 324 SPIPCNTLKMNSQVAP-PAFTTTGVMSVKIAVLRRP-IPKVHFPPYFSAKYPP 172
SP+P + L +S + P+ T I+ L RP +P H P+ + +Y P
Sbjct: 330 SPVPSSHLLPSSTITTQPSLTIVHNYHPAISYLHRPPVPSSHLLPFIAHQYHP 382
>SB_57125| Best HMM Match : HtpX_N (HMM E-Value=9.3)
Length = 76
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 218 IGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIVLARWVPPH 379
IG L AI L+ P A WL + V+ G EG TM + + +P H
Sbjct: 1 IGALILAIDILLLP---SATSYEWLLVFAVVYGTSEGMTMTSNHCNIISLLPSH 51
>SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062)
Length = 282
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = -1
Query: 486 LAQSPSPAIKNPDMKEPNIFPICAPPKTKA---PCRDRSWGGTHRASTIIRAGIVGPSPI 316
L+ PS +++P K FP P + P + ++ + + S +R+ +P
Sbjct: 93 LSPQPSLQVRSPPFKSA-AFPSSPQPSLQVHSPPFKSAAFPSSPQPSLQVRSPPFKSTPR 151
Query: 315 PCNTLKMNSQVAPPAFTTTGVMSVKIAVLRRPIPKVHFPPYFSAKYP 175
P + + + QV P F + +S LR P P FS+ P
Sbjct: 152 PSSP-QPSFQVRSPLFKSAAFLSSPQPSLRVRTPPFKSAPLFSSPQP 197
>SB_14144| Best HMM Match : MFS_1 (HMM E-Value=0.047)
Length = 355
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 344 LMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMAGDGDWANVFYFFG 505
++++ A W PP ER A + +G+ S++ G M D + N+ Y G
Sbjct: 34 VLVLSASWFPPEERMTATAFATLVSYLGSA-SSYVMGPYMVPDVETGNITYTTG 86
>SB_1379| Best HMM Match : FHA (HMM E-Value=3.7e-18)
Length = 375
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 242 FTLMTPVVVKAGGATWLFILRVLQGMG-EGPTMP 340
+ L V+K GG++ LFI RVL M +GP P
Sbjct: 154 YRLRVGYVIKFGGSSRLFICRVLMIMSLQGPNEP 187
>SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)
Length = 1067
Score = 27.5 bits (58), Expect = 9.5
Identities = 23/93 (24%), Positives = 36/93 (38%)
Frame = +2
Query: 227 LSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALV 406
LST + + T +V + L + G G A+ +++ + P R + L
Sbjct: 148 LSTMVAGVSTLLVPQLDSFAGLIGYFTVNGFANGGYATAVFMIVYQITIPSMRIQALGLY 207
Query: 407 FGGAQIGNIFGSFMSGFLMAGDGDWANVFYFFG 505
F + GS GFL G + VFY G
Sbjct: 208 FFVVSLAFASGSPFGGFLADSLGSYIVVFYVSG 240
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 336 IVGPSPIPCNTLKMNSQVAPPAFTTTGVMSVKIAVLRRPIP 214
+ GP P + Q AP + TT V S + V P+P
Sbjct: 854 VKGPGPFSPPIMATTDQDAPSSMRTTNVTSTSLEVHWAPVP 894
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Frame = -1
Query: 462 IKNPDMKEPNIFPICAPPKT--KAP----CRDRSWG----GTHRASTIIRAGIVGPSPIP 313
++ P + P++ P+C PP K P C WG G+ A + A +V S
Sbjct: 40 LERPVLTNPHVSPVCLPPVNAGKVPVGKNCFITGWGRVFEGSDEAEFLQEAELVVASNAK 99
Query: 312 CNTLKMNSQVAP 277
C+ K N ++ P
Sbjct: 100 CD--KKNGELLP 109
>SB_16641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.5 bits (58), Expect = 9.5
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Frame = -3
Query: 373 WNPSSQYYHQSRHCWTLTHSL*YSQNEQPSSSPSFHNYGRHEREDSCTQKTYSQ---SPF 203
W+PS Y W+ T ++ + + S S + + YG E S Y SP
Sbjct: 54 WSPSDAIYRYGHSEWSPTDAIYRHGHSEWSPSDAIYRYGHSEWSPSDAIYRYGHSEWSPT 113
Query: 202 PSVF---FRQVSPRDMSYSVSIVKPAEYQALR*FGPIEYSV 89
+++ + SP D Y + + A+ +G E+S+
Sbjct: 114 DAIYRYGHSEWSPSDAIYRYGHSEWSPTDAIYRYGHPEWSL 154
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -1
Query: 531 PRTKGTPKHPKK*NTLAQSPSPAIKNPDMKEPNIFPICAPPKTKAP 394
P T P P N P P K P P P PP T P
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGP 394
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,395,963
Number of Sequences: 59808
Number of extensions: 523489
Number of successful extensions: 1434
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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