Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30263
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|R...   215   8e-55
UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep: F...   105   1e-21
UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2; Obtectom...    99   1e-19
UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;...    85   1e-15
UniRef50_A5E451 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  

>UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|Rep:
           Fibrohexamerin precursor - Bombyx mori (Silk moth)
          Length = 220

 Score =  215 bits (525), Expect = 8e-55
 Identities = 96/98 (97%), Positives = 97/98 (98%)
 Frame = +2

Query: 110 REDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWL 289
           +EDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWL
Sbjct: 123 KEDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWL 182

Query: 290 SKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCHH 403
           SKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGC H
Sbjct: 183 SKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCQH 220



 Score = 83.8 bits (198), Expect = 3e-15
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = +1

Query: 1   VSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFK 111
           VSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFK
Sbjct: 87  VSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFK 123


>UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep:
           Fibroin P25 - Papilio xuthus
          Length = 215

 Score =  105 bits (252), Expect = 1e-21
 Identities = 49/97 (50%), Positives = 70/97 (72%)
 Frame = +2

Query: 110 REDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWL 289
           +ED   S+ I G+YPLIRLTT     N  +LCS+ TFAD+   LP F +NPN+++TA +L
Sbjct: 119 QEDRQFSYTIQGTYPLIRLTTNLHASNGLNLCSSLTFADVVA-LPKFRLNPNNKQTANYL 177

Query: 290 SKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCH 400
           S+DLTLL+I+ERE  F + + LAR FI+  +C++GC+
Sbjct: 178 SRDLTLLNIFERECFFWRASLLARYFINSLICNYGCN 214



 Score = 43.6 bits (98), Expect = 0.004
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = +1

Query: 1   VSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFKGRRR 123
           VSEF+ N+ +   VL++DCP L+FESNR   QH S +  R+
Sbjct: 83  VSEFFINLSSKTAVLSLDCPNLDFESNRLTIQHASLQEDRQ 123


>UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2;
           Obtectomera|Rep: Fibrohexamerin precursor - Galleria
           mellonella (Wax moth)
          Length = 218

 Score = 98.7 bits (235), Expect = 1e-19
 Identities = 46/96 (47%), Positives = 66/96 (68%)
 Frame = +2

Query: 110 REDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWL 289
           +E+   +++I G YPLIRLTT     +  +LC+AFT+AD+   LPIF I+P D+ TA +L
Sbjct: 123 QEETTYNYHIRGIYPLIRLTTNLLNADRLNLCNAFTYADVTA-LPIFKIDPKDRPTANFL 181

Query: 290 SKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGC 397
           S+DL+LL+IYERE    +   L R F++  +CDFGC
Sbjct: 182 SRDLSLLNIYERETFAYRPPQLIRQFVNSLICDFGC 217



 Score = 45.2 bits (102), Expect = 0.001
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   VSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMSFK 111
           VSEF+ NV+   +VL VDCP L+ ES+RTL QH S +
Sbjct: 87  VSEFFFNVKADTSVLAVDCPNLDLESDRTLIQHASLQ 123


>UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;
           Yponomeuta evonymellus|Rep: Low molecular weight silk
           protein - Yponomeuta evonymella (Bird-cherry ermine
           moth)
          Length = 217

 Score = 85.4 bits (202), Expect = 1e-15
 Identities = 36/96 (37%), Positives = 63/96 (65%)
 Frame = +2

Query: 113 EDVVLSFYINGSYPLIRLTTVFDKGNNFDLCSAFTFADLAGGLPIFHINPNDQRTAQWLS 292
           ED V  ++IN +YP++RLTT  +  +  + CS +TF ++   LPIFHI+P D+ T+++L+
Sbjct: 121 EDSVYQYHINSTYPILRLTTNMNNADRINFCSEYTFVEIPV-LPIFHIDPKDKLTSKFLT 179

Query: 293 KDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCH 400
           +D++ L  +ERE    + + +   F+   +CDFGC+
Sbjct: 180 RDMSELFAFERETFNYRGSGIMNWFLQHKICDFGCN 215



 Score = 36.3 bits (80), Expect = 0.67
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 1   VSEFYDNVRTLKTVLTVDCPWLNFESNRTLAQHMS 105
           VSEF+ N+ T K +L++DC     E++RT+ QH S
Sbjct: 84  VSEFFFNMDTDKALLSIDCLDFGLEADRTVLQHRS 118


>UniRef50_A5E451 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 793

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +2

Query: 215 TFADLAGGLPIFHINPNDQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFIS 373
           TF+D     P  HIN    R +    K L +L  Y  EH FG R W+ ++++S
Sbjct: 138 TFSDFIASNP--HINTESPRFSLESEKTLIILSPYSPEHAFG-RKWVTKTYLS 187


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,206,399
Number of Sequences: 1657284
Number of extensions: 12772779
Number of successful extensions: 32491
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32478
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)