Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30261
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 346 7e-96
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 346 7e-96
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 344 3e-95
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 343 5e-95
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 341 4e-94
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 335 1e-92
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 330 5e-91
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 292 1e-79
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 257 4e-69
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 3e-50
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 180 1e-45
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 173 1e-43
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 146 2e-35
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 142 1e-34
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 142 1e-34
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 107 7e-24
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 2e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 90 1e-18
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 79 2e-15
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 61 6e-10
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.18
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 0.55
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.2
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.9
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 5.1
SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0) 28 5.1
SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4) 28 6.7
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 28 6.7
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 27 8.9
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 346 bits (851), Expect = 7e-96
Identities = 159/175 (90%), Positives = 163/175 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 175
Score = 345 bits (847), Expect = 2e-95
Identities = 159/174 (91%), Positives = 162/174 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 264 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 443
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVDLVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 444 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
IRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 608
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 346 bits (851), Expect = 7e-96
Identities = 162/177 (91%), Positives = 163/177 (92%)
Frame = +3
Query: 75 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 254
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 435 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
LDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 239
Score = 344 bits (845), Expect = 4e-95
Identities = 157/175 (89%), Positives = 163/175 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
RIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 760
Score = 163 bits (397), Expect = 7e-41
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 264 VPRAVFVDLEPTV 302
VPRAVFVDLEPTV
Sbjct: 574 VPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 344 bits (846), Expect = 3e-95
Identities = 158/174 (90%), Positives = 162/174 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 264 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 443
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 444 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
IRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP 174
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 343 bits (844), Expect = 5e-95
Identities = 158/175 (90%), Positives = 162/175 (92%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
R RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAP 175
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 341 bits (837), Expect = 4e-94
Identities = 156/174 (89%), Positives = 161/174 (92%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 263
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 264 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 443
VPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 444 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
IRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP 979
Score = 334 bits (821), Expect = 3e-92
Identities = 151/174 (86%), Positives = 160/174 (91%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 264 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 443
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 444 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
+RKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP 546
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 335 bits (824), Expect = 1e-92
Identities = 153/175 (87%), Positives = 160/175 (91%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
R+RKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 175
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 330 bits (811), Expect = 5e-91
Identities = 147/174 (84%), Positives = 160/174 (91%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 263
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 264 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 443
VPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ +D VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 444 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
IRKLADQC+GLQGFL+FH LL+ERLSVDYGKKSKLEFAIYPAP
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAP 593
Score = 307 bits (753), Expect = 5e-84
Identities = 138/160 (86%), Positives = 147/160 (91%)
Frame = +3
Query: 126 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 305
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 306 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 485
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++++VLDR+RKLADQCTGLQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 486 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
LIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 160
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 292 bits (717), Expect = 1e-79
Identities = 140/175 (80%), Positives = 146/175 (83%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
HVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHYTIGK+ VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
R+RKLADQC+GLQGF IFH LLMERLSVDYGKKSKLEFA+YPAP
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAP 165
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 257 bits (630), Expect = 4e-69
Identities = 117/140 (83%), Positives = 126/140 (90%)
Frame = +3
Query: 186 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 365
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 366 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 545
KEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFLIFH LLME
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLME 120
Query: 546 RLSVDYGKKSKLEFAIYPAP 605
RLSVDYGKKSKLEFA+YPAP
Sbjct: 121 RLSVDYGKKSKLEFAVYPAP 140
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 195 bits (475), Expect = 3e-50
Identities = 88/122 (72%), Positives = 102/122 (83%)
Frame = +3
Query: 240 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 419
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 420 IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 599
+V++V+D+IRK+ DQC+GLQGFLIFH L+ E LSVDYGKKSKLEFA+YP
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 600 AP 605
AP
Sbjct: 1085 AP 1086
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 182 bits (444), Expect = 2e-46
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = +3
Query: 300 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 479
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 480 GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
GFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 112
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 180 bits (437), Expect = 1e-45
Identities = 84/99 (84%), Positives = 87/99 (87%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 488
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 489 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
IFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 100
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 173 bits (420), Expect = 1e-43
Identities = 79/99 (79%), Positives = 85/99 (85%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 488
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 489 IFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
IFH LLMERLSVDYGKKSKLEFA+YPAP
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAP 100
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 2e-40
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 261 HVPRAVFVDLEPTVVDEVR 317
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 146 bits (353), Expect = 2e-35
Identities = 72/180 (40%), Positives = 101/180 (56%)
Frame = +3
Query: 66 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 245
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 246 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 425
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 426 DLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
D VLD +RK A+ C LQGF + H LL+ ++ +Y + F++ P+P
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 386
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 142 bits (345), Expect = 1e-34
Identities = 69/175 (39%), Positives = 99/175 (56%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 173
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 142 bits (345), Expect = 1e-34
Identities = 68/175 (38%), Positives = 101/175 (57%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 440
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
+RK A+ C +QGF + H LL+ ++ +Y + F+I P+P
Sbjct: 119 VVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSP 173
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 261 H 263
H
Sbjct: 256 H 256
Score = 78.2 bits (184), Expect = 5e-15
Identities = 36/52 (69%), Positives = 39/52 (75%)
Frame = +3
Query: 450 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
K ADQCTGLQGFL+FH LLMERLSVDYGK+SKLEFA+YPAP
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAP 306
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 107 bits (257), Expect = 7e-24
Identities = 49/117 (41%), Positives = 72/117 (61%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 435 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
LD +RK A+ C +QGF + H LL+ ++ +Y + F++ P+P
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSP 118
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 5e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 455
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 455
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/117 (32%), Positives = 66/117 (56%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 435 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
D +RK A+ C +QG + L++ ++ +Y + F++ P+P
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSP 129
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 81.4 bits (192), Expect = 5e-16
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 260
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 261 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 359
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/50 (76%), Positives = 38/50 (76%)
Frame = +3
Query: 456 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
ADQCTGLQGFLIFH LLMERLSVDYGKKSKLEFAIYPAP
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 50
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +3
Query: 366 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 545
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I H LL+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 546 RLSVDYGKKSKLEFAIYPAP 605
++ +Y + F + P+P
Sbjct: 62 KIREEYPDRLVSSFCVLPSP 81
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDG-----QMPTDKTIGGGDDSFNTFFSETGAG 257
+++ +GQ G QIG ++L +E + + ++ T ++S FF+
Sbjct: 4 VTLQLGQCGNQIGRELFDLI-VEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 258 KHVPRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 422
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G +
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKS 120
Query: 423 VDLVLDRIRKLADQCTGLQGFL 488
+D VLD +++ ++C L GFL
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 270 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 389
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +3
Query: 444 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP 605
+RK A+ C +QGF + H L++ L +Y + +++P+P
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSP 54
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 257
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 258 KHVP-RAVFVDLEP 296
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 267 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 416
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 141 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 245
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 216 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 106
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 162 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 278
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 311 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 421
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0)
Length = 2007
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 433 FWTESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WSVSPLTTA 567
FW+ S+SS T VP +T + VP++G Y VSP+T+A
Sbjct: 165 FWSSSSSSPT-VPN-----KTTNGISVPSVGRSSYSTRVSPITSA 203
>SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4)
Length = 507
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 395 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 520
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 142 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 186
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 395 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 520
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 763 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 807
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 323 ASADLINNSRFKID-EDSTGYVLASSGLAEESVERIVSTP 207
ASAD + + ID +D++G L SGL EE +E IV P
Sbjct: 1043 ASADKVKSPVLSIDLKDTSGQKLEISGLKEE-IELIVEGP 1081
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 516 RYLHRRSGRSGILADRYTGQRACGFCPKPNLRFPF 412
RY H + +T +R C F P N+ FPF
Sbjct: 426 RYGHEHDTNTSRYEHEHTTKRMCSFRPGSNVVFPF 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,069,930
Number of Sequences: 59808
Number of extensions: 445908
Number of successful extensions: 1168
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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