Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30259
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    25   0.42 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.0  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 413 PLVDSLGGNGVAHVTSWPAPSKASTIPLP 327
           P+  S+GG+G     S   P+K+ST P P
Sbjct: 46  PVSFSMGGHGSLLSPSGNTPNKSSTSPYP 74


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 186 VIYVFAIDVWKSRFYKLCESILYCLPGRKLR 94
           V  + A + WK +++    + L  L GRK+R
Sbjct: 66  VYQILAYNFWKKKYWSEFLANLKLLKGRKIR 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 486  SVSLVVHVDHFTYRCCG 436
            +V+  + +D F+ RCCG
Sbjct: 962  AVAWTIDLDDFSNRCCG 978


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 525 YHEAVPLGTSAAAGDRQREIRRGRHRSPSSTMPRRVTE 638
           + E  P  T     D  R+ R+G   SP++T     TE
Sbjct: 83  HFEQYPNPTYYNLADPARDSRKGLFWSPAATAAATATE 120


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 311 REGIGNTQSTWYARADVTTHTKKSSN 234
           RE   NTQS+  +     TH +K  N
Sbjct: 336 RESTTNTQSSSLSEFLTNTHKRKIEN 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,899
Number of Sequences: 336
Number of extensions: 3375
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)