Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30258
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    27   0.16 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    27   0.16 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   3.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.1  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 FVKITYVMYLTXLASAWLKCQRTPNCTQSCWSHLLC 464
           +   T  +Y T L +A   C  TPN T + WSH  C
Sbjct: 122 YYHFTLELY-TVLGAACQVC--TPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 FVKITYVMYLTXLASAWLKCQRTPNCTQSCWSHLLC 464
           +   T  +Y T L +A   C  TPN T + WSH  C
Sbjct: 122 YYHFTLELY-TVLGAACQVC--TPNATNTVWSHCQC 154


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 488 PTVTIRVRQTDKALVESLLGKAPTDYKN 571
           P V +        L+  +LG AP  YKN
Sbjct: 2   PQVKLHKHYVPIILLSKILGIAPISYKN 29


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 446 LVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAPTDYKNKIKKDVV 592
           LV++  + L +L E     + R+ DKA  E L     +   NK++K VV
Sbjct: 530 LVSVTKEGL-ELPEDEEEKKKREEDKAKFEGLCKVMKSILDNKVEKVVV 577


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 200 PSHRFLRPF 174
           P HRFL PF
Sbjct: 376 PDHRFLEPF 384


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 484 GTHCHHPRPSNRQGSGGVPARKSPNRLQ 567
           G H     PS   G+GG+P +    R Q
Sbjct: 255 GLHATGSAPSPTAGAGGLPPQVPSPRSQ 282


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 416 PKDTKLYSELLVTLI 460
           PK  K+YS LL+T +
Sbjct: 20  PKSNKIYSFLLLTTL 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,965
Number of Sequences: 336
Number of extensions: 2312
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)