Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30258
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    29   0.088
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    29   0.088
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   4.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   5.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   5.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   5.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.7  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 0.088
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 375 VMYLTXLASAWLKCQRTPNCTQSCWSHLLC 464
           V Y T L +A   C  TPN T + WSH  C
Sbjct: 170 VEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 29.5 bits (63), Expect = 0.088
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 375 VMYLTXLASAWLKCQRTPNCTQSCWSHLLC 464
           V Y T L +A   C  TPN T + WSH  C
Sbjct: 170 VEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 350 VXSDELGSACSKIGSS 303
           V  D LGSACS++ SS
Sbjct: 69  VGVDSLGSACSQLSSS 84


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 475 PAHGTHCHHPRPSNRQGSGG 534
           P H TH HH    +  G GG
Sbjct: 278 PTHQTHHHHHHHQHGGGVGG 297


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 475 PAHGTHCHHPRPSNRQGSGG 534
           P H TH HH    +  G GG
Sbjct: 278 PTHQTHHHHHHHQHGGGVGG 297


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 475 PAHGTHCHHPRPSNRQGSGG 534
           P H TH HH    +  G GG
Sbjct: 230 PTHQTHHHHHHHQHGGGVGG 249


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
 Frame = +2

Query: 224 KGRLVQQQRLKIMEYSEKXEKQXELXKKIQS-SNMLNQARLXX---------LKVREDHV 373
           K ++  Q +L+  +  +   KQ EL KKIQ  +    Q R+           LK ++DH 
Sbjct: 407 KDKISHQNKLQD-DLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHY 465

Query: 374 RNVLDEXRKRLAEVPKDTKLYSELLVTLIVQALFQLMEPTVTIRVRQTDKALVESLL--G 547
           +++ ++  K+   V +    Y E L     QAL + M     +  R + + ++ES L  G
Sbjct: 466 QSLRNDIWKKETAVTQTLSGYKEELAR-ADQAL-RSMAGKPILNGRDSVRKVLESFLQRG 523

Query: 548 KAPTDYKN 571
           +   D  N
Sbjct: 524 REYADIAN 531


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 490 HCHHPRPSNRQGSGGVPARKSPNRLQE*DQ 579
           H  HP  +  QG+G +P+++   + Q+  Q
Sbjct: 232 HQQHPPGAGVQGAGPIPSQQKHQQHQQQQQ 261


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,940
Number of Sequences: 2352
Number of extensions: 9485
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)