Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30257
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SSD3 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.11
UniRef50_Q8TFG8 Cluster: Putative uncharacterized membrane prote... 36 1.4
UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454; ... 34 4.3
UniRef50_Q8IBY8 Cluster: Putative uncharacterized protein PF07_0... 34 4.3
UniRef50_UPI00006CD129 Cluster: TPR Domain containing protein; n... 33 5.6
UniRef50_Q03DM1 Cluster: ABC-type multidrug transport system, pe... 33 5.6
UniRef50_A2EER3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A0GWH4 Cluster: Lipopolysaccharide biosynthesis; n=2; C... 33 7.5
UniRef50_UPI0000E24C21 Cluster: PREDICTED: similar to breast can... 33 9.9
UniRef50_A5E532 Cluster: Exocyst complex component EXO84; n=1; L... 33 9.9
>UniRef50_A7SSD3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 280
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/101 (27%), Positives = 45/101 (44%)
Frame = -3
Query: 371 LH*FPTLPQGIFVKQFSFLCQYSNQLNRSHCRFFQQEYRHSRIH*NPGLYQYPHLLLYFG 192
+H +P L Q + + C Y + HC +Y S IH P LYQY ++
Sbjct: 29 IHRYPCLYQYLSSHIHRYPCLYQYLSSHIHCYPCLYQYLSSHIHRYPCLYQYLSSHMH-R 87
Query: 191 FSCPFSLVSFCHLFQASFFPLASNFFDFLSSFSHIFSCLYK 69
+ C + +S H+ + +P + LSS H + CLY+
Sbjct: 88 YPCLYQYLS-SHIHR---YPCLYQYLITLSSHIHRYPCLYQ 124
Score = 36.7 bits (81), Expect = 0.61
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Frame = -3
Query: 371 LH*FPTLPQGIFVKQFSFLCQY---SNQLNRSHCRFFQQEYRHSRIH*NPGLYQYPHLLL 201
+H +P L Q + + C Y S+ ++R C + S IH P LYQY +
Sbjct: 71 IHRYPCLYQYLSSHMHRYPCLYQYLSSHIHRYPCLYQYLITLSSHIHRYPCLYQYQSSHI 130
Query: 200 YFGFSCPFS-LVSFCHLFQASFFPLASN------FFDFLSSFSHIFSCLYK 69
+ + C + L S H + + L+S+ + +LSS H +SCLY+
Sbjct: 131 H-RYPCLYQYLSSHIHRYPCLYQYLSSHIHRYPCLYKYLSSHIHRYSCLYQ 180
Score = 35.9 bits (79), Expect = 1.1
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = -3
Query: 314 CQYSNQLNRSHCRFFQQEYRHSRIH*NPGLYQYPHLLLYFGFSCPFS-LVSFCHLFQASF 138
C Y + HC +Y S IH P LYQY ++ + C + L S H + +
Sbjct: 6 CLYQYLSSHIHCYPCLYQYLSSHIHRYPCLYQYLSSHIH-RYPCLYQYLSSHIHCYPCLY 64
Query: 137 FPLASN------FFDFLSSFSHIFSCLYK 69
L+S+ + +LSS H + CLY+
Sbjct: 65 QYLSSHIHRYPCLYQYLSSHMHRYPCLYQ 93
Score = 35.1 bits (77), Expect = 1.8
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = -3
Query: 371 LH*FPTLPQGIFVKQFSFLCQY---SNQLNRSHCRFFQQEYRHSRIH*NPGLYQYPHLLL 201
+H +P L Q + + C Y S+ ++R C + +Y S IH P LYQY +
Sbjct: 1 IHRYPCLYQYLSSHIHCYPCLYQYLSSHIHRYPCLY---QYLSSHIHRYPCLYQYLSSHI 57
Query: 200 YFGFSCPFS-LVSFCHLFQASFFPLASN------FFDFLSSFSHIFSCLYK 69
+ + C + L S H + + L+S+ + +LSS H + CLY+
Sbjct: 58 HC-YPCLYQYLSSHIHRYPCLYQYLSSHMHRYPCLYQYLSSHIHRYPCLYQ 107
Score = 34.3 bits (75), Expect = 3.2
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Frame = -3
Query: 371 LH*FPTLPQGIFVKQFSFLCQY---SNQLNRSHCRFFQQEYRHSRIH*NPGLYQYPHLLL 201
+H +P L Q + + C Y S+ ++R C + +Y S IH P LY Y +
Sbjct: 144 IHRYPCLYQYLSSHIHRYPCLYKYLSSHIHRYSCLY---QYLSSHIHRYPCLYPYLSSHI 200
Query: 200 YFGF-SCPFSLVSFCHLFQASFFPLASN------FFDFLSSFSHIFSCLYK 69
++ P L S H + + L+S+ + +LSS H + CLY+
Sbjct: 201 HWHTPPIPIRLSSHIHRYPCLYQYLSSHIHRYPCLYQYLSSHIHRYPCLYQ 251
>UniRef50_Q8TFG8 Cluster: Putative uncharacterized membrane protein
PB15E9.02c; n=1; Schizosaccharomyces pombe|Rep: Putative
uncharacterized membrane protein PB15E9.02c -
Schizosaccharomyces pombe (Fission yeast)
Length = 188
Score = 35.5 bits (78), Expect = 1.4
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -3
Query: 383 RLYFL--H*FPTLPQGIFVKQFSFLCQYSNQLNRSHCRFFQQEYRHSRIH*NPGLYQYPH 210
RL+F+ FP L IF +F+ +S+ L S R + Y H + +
Sbjct: 20 RLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYHHHHTFTIEAFFYWFF 79
Query: 209 LLLYFGFSC-PFSLVSFCHLFQASFFPLASNFFDF--LSSFSHIFSCLY 72
+F C F + F H + ++ P FF F S FS +F+ L+
Sbjct: 80 FFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFFSFLFTSLH 128
>UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454;
n=1; Mycoplasma synoviae 53|Rep: hypothetical protein
MS53_0454 - Mycoplasma synoviae 53
Length = 208
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 212 HLLLYFGFSCPFSLVSFCHLFQASFFPLAS-NFFDFLSSFSHIFS 81
H L+F F FS S+C F + F+ S NFF+F S+ FS
Sbjct: 52 HFSLWFFFCFYFSFSSWCSFFNSRFYSFFSFNFFNFYFFSSYCFS 96
>UniRef50_Q8IBY8 Cluster: Putative uncharacterized protein PF07_0042;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0042 - Plasmodium falciparum
(isolate 3D7)
Length = 2910
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 206 VNVDIDIDQDSNEFLNVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIE 385
+N+ +D ++ NE LN+ + EK+ N + L + E+ + LE + G++ K T++
Sbjct: 2006 LNILLDQNKKINEELNIQVEQEKLINNEIIVQLKKENEENNKINSLLEEQNGLNKKVTLQ 2065
>UniRef50_UPI00006CD129 Cluster: TPR Domain containing protein; n=2;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 878
Score = 33.5 bits (73), Expect = 5.6
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = -1
Query: 358 QLYLKEFL*SNFLFYVSIQIS*TVAI-VDFFNKNIDIQEF 242
+L +K++ F+F S+QI T+ I +DFF++NI++ +F
Sbjct: 674 KLSIKQYFIDEFIFNSSVQIELTLLIQMDFFSQNINLSQF 713
>UniRef50_Q03DM1 Cluster: ABC-type multidrug transport system,
permease component; n=16; Bacilli|Rep: ABC-type
multidrug transport system, permease component -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 380
Score = 33.5 bits (73), Expect = 5.6
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 DILVEKIYNGYGLTDLNTDIEK----KIALQKFLEVELGISAKSTIEERNQAILDFVTKI 424
D ++EK N + +T NTD K K+A + + V K +E+ N+A+ + TK+
Sbjct: 89 DTIIEKDGNNFNITYANTDATKTATTKMAFKNAVTVNNIKQLKKHLEQSNRALNELQTKL 148
Query: 425 SVNTQTKDVAQKNL 466
++ T+ K V K++
Sbjct: 149 ALVTK-KSVKTKSM 161
>UniRef50_A2EER3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 663
Score = 33.5 bits (73), Expect = 5.6
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = -1
Query: 496 INTKNIQFVKKILLSYIFSLSID*NFCYKI*N-GLITLFDCTF--CTNSQLYLKEFL*SN 326
+ + NI+FV +L +Y F +D CY N LF TF C++ LY+ EF+ +N
Sbjct: 240 VASHNIEFVTYLLNNYTFD--VDLRICYNYNNLQSFLLFIDTFKLCSSGLLYISEFMGNN 297
Query: 325 FL 320
L
Sbjct: 298 IL 299
>UniRef50_A0GWH4 Cluster: Lipopolysaccharide biosynthesis; n=2;
Chloroflexus|Rep: Lipopolysaccharide biosynthesis -
Chloroflexus aggregans DSM 9485
Length = 349
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 302 LNTDIEKKIALQKFLEVELGISAKSTIEERNQAILDFVT 418
LNTD ++ +A QKF E +L ++ +++ QA++DF++
Sbjct: 159 LNTDFQESVAAQKFFE-DLIAPYQADVDQARQALIDFLS 196
>UniRef50_UPI0000E24C21 Cluster: PREDICTED: similar to breast cancer
antigen NY-BR-1; n=1; Pan troglodytes|Rep: PREDICTED:
similar to breast cancer antigen NY-BR-1 - Pan
troglodytes
Length = 532
Score = 32.7 bits (71), Expect = 9.9
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +2
Query: 209 NVDIDIDQDSNEFLNVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIEE 388
+V + ++Q+ + NVDIL EKI L +E K L++ L ++ I KS
Sbjct: 299 SVRLTLNQEEEKRKNVDILKEKIRPE---EQLRKKLEVKQQLEQALRIQ-DIELKSVTSN 354
Query: 389 RNQAILDFVTKISVNTQTKDVAQKNLFDKLNIL 487
NQ I +++ + V + F+ + IL
Sbjct: 355 LNQEIAMLKLEVATLKRQHQVKENKYFEDIKIL 387
>UniRef50_A5E532 Cluster: Exocyst complex component EXO84; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Exocyst
complex component EXO84 - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 812
Score = 32.7 bits (71), Expect = 9.9
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 242 EFLNVDILVEKIYNGYG-LTDLNTDIEKKIA-LQKFLEVELGISAKSTIEERNQAILDFV 415
EF +VDI + + N + L T IEK++ + +L + SA S + ++++L V
Sbjct: 557 EFDDVDINISR--NKFADAVQLVTAIEKRLLKFENYLAKQRN-SASSLANQTDESLLLEV 613
Query: 416 TKISVNTQTKDVAQKNLFDKLN 481
TK+ V + ++ Q LFD LN
Sbjct: 614 TKLKVENRKDEIIQCLLFDLLN 635
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,492,249
Number of Sequences: 1657284
Number of extensions: 8391919
Number of successful extensions: 20964
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20847
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -