Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30256
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z81030-4|CAB02708.1|   89|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin p...    27   7.5  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    27   10.0 
AF026209-8|AAB71275.2|  328|Caenorhabditis elegans Seven tm rece...    27   10.0 

>AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical
           protein Y51A2A.5 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 320 YQLLLNYVLSYAEKWMXXXXXXXXXXXSKCRTKPFLYPI 436
           Y++L NY++SY +               +CRT  F+ P+
Sbjct: 88  YEILKNYIISYIQDMEESKELYFAGIVDRCRTDIFIQPM 126


>Z81030-4|CAB02708.1|   89|Caenorhabditis elegans Hypothetical
           protein C01G10.6 protein.
          Length = 89

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 327 YY*ITFYHTQKNG*TISTSF*KNENRNAEPSRFYIQYNNG 446
           YY   +Y T  NG      +  N N N + + +Y   NNG
Sbjct: 20  YYLYYYYPTNNNGYQTYYYYPNNNNNNGQNTYYYDNGNNG 59


>U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin
           protein 19 protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 91  LN*VTQQCWKSSSRSKYWNSHHFEKKTEVFL 183
           LN    +C   ++ S YW+S H EKK  +F+
Sbjct: 206 LNSEKGRCVTVNTTSGYWSSTHCEKKANMFV 236


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 230 CQHCNRMNFLRSNSNLKNTSVFFSK*CEFQYLDREDDFQHC 108
           C+    M++LRSNS+    S+      +FQY D E D Q C
Sbjct: 625 CRILPLMSWLRSNSS---HSIDIPPCQQFQYSDNESDKQRC 662


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 230 CQHCNRMNFLRSNSNLKNTSVFFSK*CEFQYLDREDDFQHC 108
           C+    M++LRSNS+    S+      +FQY D E D Q C
Sbjct: 625 CRILPLMSWLRSNSS---HSIDIPPCQQFQYSDNESDKQRC 662


>AF026209-8|AAB71275.2|  328|Caenorhabditis elegans Seven tm
           receptor protein 134 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 586 FFQTIY-YNVVAFLVSF*KTLSSFPSFQL*ILTFCFPLRRVLVF 458
           FF  ++ +N+  F+ S   T + +P+F+  I+ FC  L R  VF
Sbjct: 267 FFAPLFEWNLQLFVSSAGATTAIYPAFEPLIVIFCISLFRNAVF 310


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,011,179
Number of Sequences: 27780
Number of extensions: 225729
Number of successful extensions: 413
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)