Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30254
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 37 0.007
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 34 0.062
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 32 0.25
05_04_0281 + 19779156-19779805,19781303-19781475,19781909-197821... 29 1.3
09_04_0448 + 17692650-17692970,17693461-17693811 29 1.7
05_07_0227 - 28523385-28524278 29 2.3
04_03_1034 - 21865633-21865811,21865838-21865860,21866345-218664... 28 3.1
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 28 4.0
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 28 4.0
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 27 5.3
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 27 5.3
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 27 5.3
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 27 5.3
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 27 5.3
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 27 5.3
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 27 5.3
11_06_0594 + 25349612-25352530 27 9.3
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 27 9.3
03_03_0226 + 15590276-15590469,15590515-15590539,15590865-155910... 27 9.3
03_03_0011 - 13716864-13716968,13717102-13717153,13717588-137177... 27 9.3
01_04_0130 + 16462428-16463210,16463644-16463796,16464707-164647... 27 9.3
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 VGPSSKELLTVADFEAFTSKDEVVVVGFFEKESDLK-GEFLKTADKLREEVTFAHS 165
VGP+SKE+ + D ++ +VG F + S + F++ A+KLR + F H+
Sbjct: 150 VGPASKEIKSPEDATNLIDDKKIYIVGIFSELSGTEYTNFIEVAEKLRSDYDFGHT 205
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 33.9 bits (74), Expect = 0.062
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 4 GPSSKELLTVADFEAFTS--KDEVVVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSAN 174
GP+S E+ A A S D VVVVG F + S + E F+ A+K+R + F H++
Sbjct: 136 GPASVEIAASASPPAADSIANDGVVVVGVFPELSGSEFESFMAVAEKMRADYDFRHTTDA 195
Query: 175 EVLEK 189
VL +
Sbjct: 196 GVLPR 200
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 VGPSSKELLTVADFEAFTSKDEVVVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANE 177
VGP+S +L + + V++VG F + + ++ E F+ A+K+R + F H+S
Sbjct: 161 VGPASLKLESAEEAAHSVVDKGVILVGVFPEFAGMEYENFMVVAEKMRADYDFFHTSDAS 220
Query: 178 VLEK 189
+L +
Sbjct: 221 ILPR 224
>05_04_0281 +
19779156-19779805,19781303-19781475,19781909-19782162,
19782265-19782339,19782431-19782538,19782914-19783031,
19783347-19783482,19785623-19785797,19786333-19786860,
19787624-19787836,19787850-19787882
Length = 820
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = -2
Query: 173 LAEE*AKVTSSLNLSAVLRN------SPFRSDSFSKNPTTTTSSLEVKASKS-ATVRSSL 15
L EE VT+S L VL N +P SD +PT SL++ SKS T +S+
Sbjct: 272 LREENIDVTTSETLETVLSNKVLDRETPVGSDDVLSSPTCAQPSLQIDQSKSLVTFAASV 331
Query: 14 E 12
E
Sbjct: 332 E 332
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 284 FSVSPSKATEESSNLFWSRLGRYKTTLFLYPVFSRT 177
+ + PS + + FW+R K LYP+F T
Sbjct: 84 YPIMPSDPFDRAQARFWARFAEEKCNAALYPIFMTT 119
>05_07_0227 - 28523385-28524278
Length = 297
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 285 SVTQSFHQGELSRSGRRSPKGQHP*FQQPPYCR 383
SV SFH + ++ P+ QHP Q PP R
Sbjct: 59 SVCPSFHSEDFVSPPKKPPRQQHPQQQHPPQRR 91
>04_03_1034 -
21865633-21865811,21865838-21865860,21866345-21866433,
21872484-21872894,21872968-21873284,21873389-21873467,
21873539-21873903,21874484-21874656,21874824-21874913,
21875797-21875862,21876615-21876661
Length = 612
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 118 LKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFDGDTEKVSLK 297
LK +L +E + + EK + + + + +NK E+ +A +G TEK +
Sbjct: 422 LKILRELVDEAITTSAVRQNIDEKIDQQQAIAASKRELARNKKEEHKLAMEGVTEKEMSQ 481
Query: 298 AFIKENYHGLV 330
EN +G V
Sbjct: 482 TDAAENVNGNV 492
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 94 KKTSKKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 153
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 154 HTIDKYYKPPSIEES 168
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 94 ESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDS 255
++D++GE LK A + + S+ +V+ KN+ + YR +L + +DS
Sbjct: 644 KTDVQGERLKEAQNINRSL----SALGDVISALATKNSHIPYRNSKLTHLLQDS 693
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 216 KKTSEKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 275
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 276 HTIDKYYKPPSIEES 290
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 216 KKTSEKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 275
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 276 HTIDKYYKPPSIEES 290
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 94 KKTSEKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 153
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 154 HTIDKYYKPPSIEES 168
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 265 FDGDTEKVSLKAFIKENYHGLVGVRQKDNIHD 360
F TEK +K I+ N HGLV V I D
Sbjct: 470 FQAHTEKSKVKVRIRLNLHGLVSVESAALIDD 501
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 98 KKTSEKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 157
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 158 HTIDKYYKPPSIEES 172
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 241 KKTSEKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 300
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 301 HTIDKYYKPPSIEES 315
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 91 KESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQNKFEDSSVAFD 270
K++ K + K + R EV +S E + + NNV++ +PK SVA
Sbjct: 94 KKTSEKEQKNKEKEVARAEVDIENSDCESGSEGSDHGNNVLVVKPKETTGSSSSRSVAGG 153
Query: 271 GDTEKVSLKAFIKEN 315
+K I+E+
Sbjct: 154 HTIDKYYKPPSIEES 168
>11_06_0594 + 25349612-25352530
Length = 972
Score = 26.6 bits (56), Expect = 9.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 318 IVLLDESFE*HFLGVSVE-GNRRVFKLVLESLGTIQDHIVFVSGFFKNFIG*RMSKSNLL 142
I L + S H LG+ + G+ R KL S T+ + F SG F+N + + +NLL
Sbjct: 844 ITLHETSLTEHVLGILGQLGSLRCLKLQCNS--TMGSSLSFRSGAFRNLVALVVQDNNLL 901
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 26.6 bits (56), Expect = 9.3
Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = -2
Query: 296 LSDTFSVSPSKATEESSNLFWSRLGRYKTTLFLYPVFSRTSLAEE*AKVTSSLNLSAVLR 117
++++ + + S+ S+ L W+++G ++PV++ ++ +T + N A R
Sbjct: 6 VNNSVNTNLSQVFPASTMLVWTQVGE-----IVFPVYTTMPISTC-PLMTGNENAVATNR 59
Query: 116 NSPFRSDS--FSKNPTTTTSSLEVKASKSATVRSSLELGP 3
+ D+ +KN +TTS LE ++ + RS + P
Sbjct: 60 DDSMSKDTPTEAKNGISTTSELEKDSNAAKPCRSDMNREP 99
>03_03_0226 +
15590276-15590469,15590515-15590539,15590865-15591014,
15591166-15591594
Length = 265
Score = 26.6 bits (56), Expect = 9.3
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 143 RRLLLLILQPMKFLKKPDTKTMWS----CIVPSDSRTSLKTLLLPSTETPRKCHSKLSSR 310
+RLLL++L+P+K + ++ WS C+V D R S+ P+T T LS R
Sbjct: 126 KRLLLMVLEPVK--RSDLSRLKWSSYDYCLV-LDQRCSVS----PTTST-------LSGR 171
Query: 311 RTITVWSA 334
T T WS+
Sbjct: 172 VTTTAWSS 179
>03_03_0011 -
13716864-13716968,13717102-13717153,13717588-13717719,
13718289-13718491,13718584-13718695,13719308-13719474,
13720059-13720119,13720527-13720645,13720911-13720943
Length = 327
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = -1
Query: 453 YLEDTVPPVVSALRVLGIINIIVSDNKGVAEIMDVVLLANADQTVIVLL 307
Y+E T+P V+ ++ L ++ ++ G E++ + L N + V +
Sbjct: 64 YIEQTIPGVIVSIVGLLVLGKVLEPLWGAKELLKFIFLVNLSTSACVFV 112
>01_04_0130 +
16462428-16463210,16463644-16463796,16464707-16464784,
16465229-16465348,16465419-16465585,16465683-16465710
Length = 442
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 122 LRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGP 3
LR P S S++ TTTTSS +S++ V SL GP
Sbjct: 29 LRLKPLSSSSYTTTTTTTTSS-STSSSRAPQVPPSLH-GP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.133 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,994,407
Number of Sequences: 37544
Number of extensions: 233440
Number of successful extensions: 503
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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