Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30251
(571 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 127 1e-30
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 90 2e-19
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 37 0.002
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 33 0.029
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 33 0.039
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 28 1.1
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 28 1.1
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 27 1.9
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 27 2.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 2.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 2.6
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 26 3.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 5.9
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 5.9
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 25 7.8
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 127 bits (307), Expect = 1e-30
Identities = 60/110 (54%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +1
Query: 244 PSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKI 423
P+H +N+PALSPTM +G+I +++KK GDK+ GD+LCEIETDKA + FE +EGYLAKI
Sbjct: 51 PAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKI 110
Query: 424 LIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFK-DDSSPATPQKRASQDKA 570
LI GTK VPVGK L + V ++ DVAA DF +DSS P ++ ++K+
Sbjct: 111 LIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSAKEPSAKSGEEKS 160
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 90.2 bits (214), Expect = 2e-19
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Frame = +1
Query: 214 TVQMRYY--SSLPSHIKV-NLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATM 384
+V+ RY+ S+L + +PALSPTME G+I W KEGD GD+L E+ETDKATM
Sbjct: 20 SVKQRYFHCSALNGVASMFRMPALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATM 79
Query: 385 GFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKRASQD 564
E + G LAK+LI G+ +PVGK + I+ ++++ + KD++S +S++
Sbjct: 80 DVEVQDNGILAKVLIEKGS-NIPVGKNIAIVADAEDNLKDLELPKDEASSEEQSFSSSKE 138
Query: 565 K 567
+
Sbjct: 139 E 139
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 37.1 bits (82), Expect = 0.002
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 256 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 435
++ P ++ G++ W K+ G+ +++ + + +ETDK P+ G L + L+
Sbjct: 44 RIKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKE 103
Query: 436 G 438
G
Sbjct: 104 G 104
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 33.1 bits (72), Expect = 0.029
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 169 LEYTQNQAVLSVPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSE 342
L +TQ Q +++ P W YY +P H + L T+ S WE++ G++ ++
Sbjct: 257 LRFTQRQILMNDPYWNRGF-YYDGVPPHTGMKLAREVATISYRSGPEWEQRFGNRRAD 313
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 32.7 bits (71), Expect = 0.039
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 292 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 438
SG+IV KEG K+ +GD++ + K + P G L + + G
Sbjct: 1122 SGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQG 1170
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +1
Query: 262 NLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGT 441
N P T G +V + + G+ + G+ E+E K M E+G + I P +
Sbjct: 708 NDPTQLRTPSPGKLVRFLVETGEHIKAGEAYAEVEVMKMIMPLVATEDGVVQLIKQPGAS 767
Query: 442 KGVPVGKLLCIIVGD 486
+ G +L I+ D
Sbjct: 768 --LDAGDILGILTLD 780
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 27.9 bits (59), Expect = 1.1
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 67 RNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEYTQNQAVLSVPQWTVQMRYYSSLP 246
++ L D + IRS ++ LA +V + LE + + V QW +M + +
Sbjct: 1060 KSPFLGDDEAREIRSKQSQGWGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTL 1119
Query: 247 SHIKVNLPALS 279
I+ N LS
Sbjct: 1120 QQIRQNRNELS 1130
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = -1
Query: 253 YVMVDSNNTSSEQSIVVQIELPGSVYILIIYS*LSFLPVL 134
+V SNN + + + V +E P ++++ ++ +SFLP++
Sbjct: 300 FVSFISNNVTKWRCMAVALEFPITLFLWMLAVYVSFLPIM 339
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.6 bits (56), Expect = 2.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 DKLSEGD--LLCEIETDKATMGFETPEEGYLAKILIPAGTKGV 450
D+L G L + + DK + +ETP EGY +L+ A K V
Sbjct: 798 DQLQPGKVALFVDWQIDKFSFFYETPAEGY--NLLVEANEKSV 838
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 2.6
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +1
Query: 184 NQAVLSVPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEI 363
N + + P W V+ S+L + + + PAL P+ V KK+ +
Sbjct: 646 NSSAANTPSWGVRKARASALNARSEEDFPALPPSTSKRISVQLGKKQARPVDSWGSTPNT 705
Query: 364 ETDK--ATMGFETPEEGYLAKILIPAG 438
+++ TMG + G +L G
Sbjct: 706 SSNRNSNTMGVSKKKNGKKQTVLFHIG 732
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 94 KKAIRSNITRCISTELAKRKVTNKLLEYT 180
K A+R+NI RC+ T + + N L +Y+
Sbjct: 3460 KSAVRTNIERCVQTSIESKYYKN-LTDYS 3487
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 377 QLWALRHLKKVTWPKY*FRPVQRECL 454
+LW L + K+VTW Y + R CL
Sbjct: 260 ELWCLLNDKRVTWKAYAGHWIARVCL 285
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 5.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 473 LLLEIRMMLRHSKISKMTHHLQHLK 547
L + + +L+HS I K+ H+LQ+ K
Sbjct: 4454 LNVSVSDILQHSSIEKLAHYLQYEK 4478
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.4 bits (53), Expect = 5.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 473 LLLEIRMMLRHSKISKMTHHLQHLKNGLVKI 565
L +EI L H + +L+HL+ G+V +
Sbjct: 360 LWMEIWCWLTHRSVDSYRENLKHLRTGMVDV 390
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 76 FDSVTQLFAT-LSIFFTKTIPS 14
F+S T + +T L +FFT+T PS
Sbjct: 820 FESTTLVLSTGLDVFFTRTAPS 841
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,444,143
Number of Sequences: 5004
Number of extensions: 52740
Number of successful extensions: 140
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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