Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30245
         (594 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2K9 Cluster: Diacylglycerol kinase, putative; n=1; P...    34   2.9  
UniRef50_Q11FF7 Cluster: Bile acid:sodium symporter precursor; n...    33   6.7  
UniRef50_Q22GZ9 Cluster: Zinc finger, C2H2 type family protein; ...    32   8.8  

>UniRef50_Q8I2K9 Cluster: Diacylglycerol kinase, putative; n=1;
            Plasmodium falciparum 3D7|Rep: Diacylglycerol kinase,
            putative - Plasmodium falciparum (isolate 3D7)
          Length = 1348

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 19/57 (33%), Positives = 33/57 (57%)
 Frame = +1

Query: 163  TNVYAAYSFFYRKLYTIYCL*YQRNKNLKVKHIHNKQEIIISFTNNCSPNIFIVKKY 333
            TN+Y  Y   Y+KLYT       ++K   + +I  K++++I+ TN  SP I  ++K+
Sbjct: 1190 TNIYNRYDNMYKKLYT------DQDKQNIMNNISLKKDLLINQTNINSPEIKNIEKF 1240


>UniRef50_Q11FF7 Cluster: Bile acid:sodium symporter precursor; n=5;
           Alphaproteobacteria|Rep: Bile acid:sodium symporter
           precursor - Mesorhizobium sp. (strain BNC1)
          Length = 328

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 360 HVVHFPDSLIFF-YNKYIRTTII--GKTNYNLLFIMYMFNF*VFISLVL*TIYSI 205
           HV ++  +L+FF Y   + T+ +  G TN+ L F++  F + VF  L L   YS+
Sbjct: 41  HVAYYAIALLFFVYGAKLNTSAVVAGLTNWRLQFLVLAFTYIVFPLLGLGLFYSL 95


>UniRef50_Q22GZ9 Cluster: Zinc finger, C2H2 type family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Zinc finger,
           C2H2 type family protein - Tetrahymena thermophila SB210
          Length = 386

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 157 DQTNVYAAYSFFYRKLYTIYCL*YQRNKNLKVKHIHNKQEIII 285
           DQ N    +  F  K   +YCL      ++K+KH +NKQ+ ++
Sbjct: 26  DQNNKAEIFKNFECKCGKVYCLQSSLFNHIKIKHDNNKQDFVV 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,363,368
Number of Sequences: 1657284
Number of extensions: 7936586
Number of successful extensions: 18088
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18081
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)