Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30245
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.5  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +2

Query: 188 SFTVNYILYIVYNT 229
           +FT++YIL+ ++NT
Sbjct: 255 NFTISYILFALFNT 268


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 191 FTVNYILYIVYNTKEIKT*KLNIYIINKR 277
           +  +Y L  VY+   I T + N  +INKR
Sbjct: 61  YITSYTLLSVYSLFRIATNENNSLVINKR 89


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 191 FTVNYILYIVYNTKEIKT*KLNIYIINKR 277
           +  +Y L  VY+   I T + N  +INKR
Sbjct: 61  YITSYTLLSVYSLFRIATNENNSLVINKR 89


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -2

Query: 434 YLNAKKRLYF---VTMDLCVFICVKRSIMLFISLI 339
           YL    +LYF    T  LCV +C+ R     I+L+
Sbjct: 145 YLAEAVQLYFQFYYTYFLCVIVCIFRGKYRNINLL 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,334
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)