Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30245
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71258-14|CAN86574.1|  201|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z71258-14|CAN86574.1|  201|Caenorhabditis elegans Hypothetical
           protein C01H6.8a protein.
          Length = 201

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 283 ISFTNNCSPNIFIVKKY**IREM-NNMILLLTQIKTHKSIVTK 408
           ISFT++CSP++   K +   +E+ +  I  L ++K H+ ++ K
Sbjct: 13  ISFTDSCSPDVKFEKDHHRRKELEDKFITNLAELKNHEEVLLK 55


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 413 LYFVTMDLCVFICVKRSIMLFISLI 339
           LYF  MD  VF+C K+S  LFI ++
Sbjct: 122 LYFCCMD--VFLCRKKSTWLFIGIL 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,748,924
Number of Sequences: 27780
Number of extensions: 202613
Number of successful extensions: 521
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)