Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30244
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p... 181 3e-46
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p... 161 2e-40
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p... 160 7e-40
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 64 6e-11
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc... 61 4e-10
At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutas... 52 3e-07
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas... 50 1e-06
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 44 5e-05
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 28 3.8
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 28 5.0
At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B... 28 5.0
At1g16720.1 68414.m02005 expressed protein 28 5.0
At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B... 27 8.8
>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 476
Score = 181 bits (440), Expect = 3e-46
Identities = 81/156 (51%), Positives = 113/156 (72%)
Frame = +2
Query: 101 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 280
+PP PRPY GPS +V Q + ++ PS+ + Y+KP+ + +G MQ+LYD G+RYLD
Sbjct: 41 IPPFVHQPRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYLDA 100
Query: 281 FGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLV 460
F GIVTVS GHCHP + A+ +Q +L H T +Y H I ++ E LAAK+PG+L VVY V
Sbjct: 101 FAGIVTVSCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAKMPGNLKVVYFV 160
Query: 461 NSGSEANELATLLAKAYTGNLDIISLQTSYHGYTSS 568
NSGSEANELA ++A+ YTG+L++ISL+ +YHG +S+
Sbjct: 161 NSGSEANELAMMMARLYTGSLEMISLRNAYHGGSSN 196
>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 481
Score = 161 bits (392), Expect = 2e-40
Identities = 71/153 (46%), Positives = 106/153 (69%)
Frame = +2
Query: 98 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLD 277
KMPP ++ P PY GPS ++ + ++ P++ + Y P+ + + MQ+++D +G+RYLD
Sbjct: 45 KMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYLD 104
Query: 278 LFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYL 457
FGGI TVS GHCHP+V ++ QL ++ H+T LY + I ++ E L + LPGDL VV+
Sbjct: 105 AFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKVVFF 164
Query: 458 VNSGSEANELATLLAKAYTGNLDIISLQTSYHG 556
NSG+EANELA ++A+ YTG DI+SL+ SYHG
Sbjct: 165 TNSGTEANELAMMMARLYTGCNDIVSLRNSYHG 197
>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 477
Score = 160 bits (388), Expect = 7e-40
Identities = 72/154 (46%), Positives = 102/154 (66%)
Frame = +2
Query: 95 AKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYL 274
A++PP + P PYTGPS + + ++ PS+ Y+KP+ + G MQ+L+D G+RYL
Sbjct: 41 ARLPPFAYTPPPYTGPSADVILSKRKEFLSPSMFCLYRKPLNIVDGKMQYLFDESGRRYL 100
Query: 275 DLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVY 454
D F GI V+ GHCHP V + +Q+ L H T LY + I ++ E LA+KLPGDL VV+
Sbjct: 101 DAFAGIAVVNCGHCHPDVVEPVINQIKRLQHPTVLYLNHAIADFSEALASKLPGDLKVVF 160
Query: 455 LVNSGSEANELATLLAKAYTGNLDIISLQTSYHG 556
NSG+EANELA ++AK YTG DI++++ YHG
Sbjct: 161 FTNSGTEANELALMMAKLYTGCQDIVAVRNGYHG 194
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 64.1 bits (149), Expect = 6e-11
Identities = 33/108 (30%), Positives = 60/108 (55%)
Frame = +2
Query: 188 SITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 367
S N + PV+ ++ + ++D +GKRY+D V+ GHCHPK+ AL++Q++ L
Sbjct: 51 SAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQEQVEKLTL 110
Query: 368 TTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 511
++ + + K + E+L D+ V +N+G+E E A LA+ +
Sbjct: 111 SSRAFYNDKFPVFAERLTNMFGYDM--VLPMNTGAEGVETALKLARKW 156
>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
mitochondrial, putative / acetylornithine transaminase,
putative / AOTA, putative / ACOAT, putative similar to
SP|O04866 Acetylornithine aminotransferase,
mitochondrial precursor (EC 2.6.1.11) (ACOAT)
(Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
contains Pfam profile PF00202: aminotransferase, class
III
Length = 457
Score = 61.3 bits (142), Expect = 4e-10
Identities = 36/102 (35%), Positives = 54/102 (52%)
Frame = +2
Query: 206 KKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYR 385
+ PV+L+ G L+D +GK YLD GI ++GH P A+ +Q VL H +N+Y
Sbjct: 75 RAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGHGDPDWLRAVTEQAGVLAHVSNVYY 134
Query: 386 HPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 511
E ++L A D V+ NSG+EANE A ++ +
Sbjct: 135 TIPQIELAKRLVASSFADR--VFFCNSGTEANEAAIKFSRKF 174
>At3g48730.1 68416.m05321 glutamate-1-semialdehyde 2,1-aminomutase 2
(GSA 2) / glutamate-1-semialdehyde aminotransferase 2
(GSA-AT 2) identical to GSA2 [SP|Q42522]
Length = 472
Score = 52.0 bits (119), Expect = 3e-07
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +2
Query: 209 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 388
+PV++ + D DG Y+D G +GH +V AAL + + +
Sbjct: 79 QPVVMDSAKGSRIRDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK----KGTSFGA 134
Query: 389 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 562
P + E V E + + +P + +V VNSG+EA LA+A+TG I + YHG+
Sbjct: 135 PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGKQKFIKFEGCYHGHA 193
Query: 563 SS 568
+S
Sbjct: 194 NS 195
>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
(GSA 1) / glutamate-1-semialdehyde aminotransferase 1
(GSA-AT 1) identical to GSA 1 [SP|P42799]
Length = 474
Score = 49.6 bits (113), Expect = 1e-06
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +2
Query: 209 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 388
+PVL+ ++D DG Y+D G +GH +V AAL + + +
Sbjct: 81 QPVLIDSVKGSKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK----KGTSFGA 136
Query: 389 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 562
P + E V E + + +P + +V VNSG+EA LA+A+T I + YHG+
Sbjct: 137 PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTNKEKFIKFEGCYHGHA 195
Query: 563 SS 568
++
Sbjct: 196 NA 197
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 44.4 bits (100), Expect = 5e-05
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Frame = +2
Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 382
P+++ + ++YD+ GK+YLD G+ ++G P++ +A +QL+ L +H+ N
Sbjct: 70 PLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTLPFYHSFWNRT 129
Query: 383 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL------DIISLQT 544
P + L + + + GS+AN+ L Y L I+ +
Sbjct: 130 TKPSLDLAKVLLEMFTANKMAKAFFTSGGSDANDTQVKLVWYYNNALGRPEKKKFIARKK 189
Query: 545 SYHGYT 562
SYHG T
Sbjct: 190 SYHGST 195
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 86 YSTAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLL 223
Y+ +PP + P Y P+ VY P Y KP LL
Sbjct: 75 YTKPTLPPPAYTPPVYNKPTLPAPVYTPPVYKPTLSPPVYTKPTLL 120
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 250 RQRRQEIPGSVRWNRHRLRGPLSSESKCSPQRSTRCIVAYDQPVQTSE 393
R RR+E V R E + P+R R + AY P++ +E
Sbjct: 134 RSRREEKEPEVVERGSRRHRDKKDEPEADPERDQRTVFAYQMPLKATE 181
>At3g26190.1 68416.m03268 cytochrome P450 71B21, putative (CYP71B21)
identical to Cytochrome P450 71B21 (SP:Q9LTM2)
[Arabidopsis thaliana]; similar to cytochrome P450
GB:O65784 [Arabidopsis thaliana]
Length = 499
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 350 LDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 439
+ ++W T L RHP++ + ++Q +L GD
Sbjct: 308 ITMIWALTELTRHPRVMKKLQQEIRELLGD 337
>At1g16720.1 68414.m02005 expressed protein
Length = 598
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 395 IYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHGYT 562
++EY++ L A D +V SG EAN +L KA D SL+ S GYT
Sbjct: 454 VFEYIKALPAGQETDFILVSCTGSGVEANRREQVL-KAKRAGED--SLRRSGLGYT 506
>At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B22)
Identical to cytochrome P450 71B22
(SP:Q9LTM1)[Arabidopsis thaliana];contains Pfam profile:
PF00067 cytochrome P450
Length = 500
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 350 LDVLWHTTNLYRHPKIYEYVEQLAAKLPGD 439
+ ++W T L RHP++ + ++Q ++ GD
Sbjct: 308 ITMIWAMTELARHPRVMKKLQQEIREILGD 337
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,868,851
Number of Sequences: 28952
Number of extensions: 313518
Number of successful extensions: 889
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -