Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30243
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.54 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.54 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 415 CGHPQCVSRDLFCH 456
           CG+ +C+ ++LFC+
Sbjct: 116 CGNGECIDKELFCN 129


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 415 CGHPQCVSRDLFCH 456
           CG+ +C+ ++LFC+
Sbjct: 123 CGNGECIDKELFCN 136


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 415 CGHPQCVSRDLFCH 456
           CG   C+ R LFC+
Sbjct: 124 CGDGNCIERGLFCN 137


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 553 VGSGLGSAPGIAEVHG 600
           VGSG  SAP I   HG
Sbjct: 27  VGSGRNSAPSICGEHG 42


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -2

Query: 334 SNNSSEHLSFKNEIHNRMSYIFPSLLHPKNVVAI 233
           S+NSS + + K    + MS+    ++ PK++++I
Sbjct: 564 SSNSSNYFANKTYDFHNMSFENDFIIQPKHLLSI 597


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 399 YYVEPLRSSTVRFQRSFLPRTIRLWNELPST 491
           +  + L    VRF +     T++LW++L ST
Sbjct: 74  FATKKLEQFIVRFMKYHFFGTLKLWSQLFST 104


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 59  LCVCVCLFIYFIVRKKVCCISFIWT 133
           L + VC++ ++ +    CC   I+T
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAFIIFT 276



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 60  YVCVCVYLFILLLEKKYVVFPLYGLVCICELEC 158
           ++   V+L  LL    +VV PL+ L+CI    C
Sbjct: 120 FIIFTVHLLFLLCIYYFVV-PLFFLLCIYYFYC 151



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/48 (20%), Positives = 20/48 (41%)
 Frame = +1

Query: 19  FNVHRQNICMTKRIMCVCVFIYLFYC*KKSMLYFLYMDLYVYVSWSAC 162
           F +H    C+   ++C+  F Y F      +L  + +  + Y+    C
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 153 PTHIYIQVHIKEIQHTFFLTI 91
           PTH Y    +  ++ TF+L +
Sbjct: 309 PTHFYCAFSLYPLKSTFYLNV 329


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 33  TKYLYDKTNYVCVCVYLFILLLEKKYVVFPLYGLVCICE 149
           T Y+    N    C  L  L+     V+F LY L  +C+
Sbjct: 235 TLYIILTNNQAKYCTTLIGLIKNCVIVIFELYYLSHVCQ 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,428
Number of Sequences: 336
Number of extensions: 4139
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)