Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30243
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 40 0.002
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 40 0.002
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 38 0.007
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 37 0.016
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 36 0.021
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 36 0.021
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 36 0.021
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 36 0.021
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 35 0.066
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 35 0.066
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 35 0.066
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 34 0.087
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 34 0.087
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 34 0.11
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 34 0.11
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 34 0.11
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 33 0.15
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 33 0.15
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 33 0.15
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.15
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 33 0.15
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.15
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 33 0.26
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 33 0.26
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 32 0.35
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 32 0.46
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 31 0.61
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 31 0.81
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27) 31 1.1
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_36832| Best HMM Match : DTHCT (HMM E-Value=9.3) 30 1.9
SB_44561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21) 29 2.5
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 29 4.3
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 28 5.7
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.7
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 28 5.7
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 5.7
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21) 28 7.5
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 27 9.9
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 27 9.9
SB_21364| Best HMM Match : Homeobox (HMM E-Value=0.27) 27 9.9
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +3
Query: 339 IPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERY 509
+P S + R HP +Y P + + F+ SF+PR IRLWN L TV Y
Sbjct: 713 LPLSTLSKPLRRSERTSHPEHYDIPYARTNI-FKYSFVPRAIRLWNSLEVTVVLAAY 768
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 366 IARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGLWRV 545
+ R R HP ++ PL +S+ SF RTI WN LP+ +F E +FK + R+
Sbjct: 821 VTRKTRRSHPESFI-PLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 390 HPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H +Y P + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 185 HSEFYTIP-NARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 390 HPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H +Y L + T ++ SFLPR +RLWN LP +V R F GL
Sbjct: 184 HSEFYTI-LNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R R+ Y ++ S+ + SF PR
Sbjct: 149 LAQLCLFY---KIRNNLVNIALPQQFQPNLRRSRTNSSKYNQIQ---SNVLSHSYSFFPR 202
Query: 459 TIRLWNELPSTV 494
TIR WN LPS V
Sbjct: 203 TIRTWNLLPSEV 214
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +3
Query: 381 SRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGLWRVLS 551
SR H Y + L+++ + F SF PRTIR WN LP+ V D FK L +S
Sbjct: 1627 SRRHSRTYHQ-LQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSALAPAIS 1681
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 381 SRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
+R H + +++ L+S+ + + SF PR IR+WN LPS V
Sbjct: 122 TRRHNHSFLQ-LQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 381 SRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
+R H + +++ L+S+ + + SF PR IR+WN LPS V
Sbjct: 441 TRRHNHSFLQ-LQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 381 SRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
+R H + +++ L+S+ + + SF PR IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQ-LQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 381 SRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
+R H + +++ L+S+ + + SF PR IR+WN LPS V
Sbjct: 387 TRRHNHSFLQ-LQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 381 SRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
SR H Y + L+++ + F SF PRTIR WN LP+ V D FK L
Sbjct: 1073 SRRHSRTYHQ-LQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1122
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 378 RSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
RS Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 1213 RSTRRKELYCNQLQANTLTFNYSFFARAIRIWNLLPNDV 1251
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 378 RSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
RS Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 143 RSTRRKELYYNQLQANTLAFNYSFFARAIRIWNLLPNDV 181
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 378 RSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
RS Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 297 RSTRRKELYYNQLQANTLAFNYSFFARAIRIWNLLPNDV 335
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 378 RSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
RS Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 248 RSTRRKELYYNQLQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 378 RSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
RS Y L+++T+ F SF R IR+WN LP+ V
Sbjct: 503 RSTRRKELYYNQLQANTLAFNYSFFARAIRIWNLLPNDV 541
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 34.3 bits (75), Expect = 0.087
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 824 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 877
Query: 459 TIRLWNELPSTVFPERYDTSLFKRGLWRVL 548
TIR WN LPS V E FK VL
Sbjct: 878 TIRTWNLLPSEVI-ESSSIDSFKSSALPVL 906
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 34.3 bits (75), Expect = 0.087
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 104 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 157
Query: 459 TIRLWNELPSTVFPERYDTSLFKRGLWRVL 548
TIR WN LPS V E FK VL
Sbjct: 158 TIRTWNLLPSEVI-ESSSIDSFKSSALPVL 186
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 34.3 bits (75), Expect = 0.087
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 743 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 796
Query: 459 TIRLWNELPSTVFPERYDTSLFKRGLWRVL 548
TIR WN LPS V E FK VL
Sbjct: 797 TIRTWNLLPSEVI-ESSSIDSFKSSALPVL 825
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 149 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 202
Query: 459 TIRLWNELPSTV 494
TIR WN LPS V
Sbjct: 203 TIRTWNLLPSEV 214
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 411 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 464
Query: 459 TIRLWNELPSTV 494
TIR WN LPS V
Sbjct: 465 TIRTWNLLPSEV 476
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 58 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 111
Query: 459 TIRLWNELPSTV 494
TIR WN LPS V
Sbjct: 112 TIRTWNLLPSEV 123
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 515 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 568
Query: 459 TIRLWNELPSTV 494
TIR WN LPS V
Sbjct: 569 TIRTWNLLPSEV 580
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+ + E FKR L
Sbjct: 110 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 165
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+ + E FKR L
Sbjct: 311 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 366
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+ + E FKR L
Sbjct: 297 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 352
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+ + E FKR L
Sbjct: 517 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 572
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+ + E FKR L
Sbjct: 214 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELDSIEHFKRDL 269
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+ + E FKR L
Sbjct: 602 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 657
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +3
Query: 279 LIRLCISFLNDKCSEELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPR 458
L +LC+ + K L + +F + R+ Y ++ S+ + SF PR
Sbjct: 190 LAQLCLFY---KIRNNLVNIALPQQFQPNLRPSRTNSSKYNQIQ---SNVLSHSYSFFPR 243
Query: 459 TIRLWNELPSTV 494
TIR WN LP+ V
Sbjct: 244 TIRTWNLLPAQV 255
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 408 EPLRSSTVRFQRSFLPRTIRLWNELPSTV 494
+ L S+ + F SF PR IR WN LP +
Sbjct: 270 QQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 360 HRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPS 488
H+ R R+ + YY E +++ ++ SF PRTIR WN LP+
Sbjct: 543 HQDLRTRNSHNFKYYQE--KATKNKYFYSFFPRTIRHWNTLPN 583
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 369 ARHRSR-VHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPS 488
+R+ +R HP Y + ++ S+ PRT++LWN LPS
Sbjct: 723 SRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 763
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 369 ARHRSR-VHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELPS 488
+R+ +R HP Y + ++ S+ PRT++LWN LPS
Sbjct: 226 SRYNTRSYHPNNYRLFSTHNQNYYRNSYFPRTVKLWNSLPS 266
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 435 FQRSFLPRTIRLWNELP-STVFPERYDTSL 521
F+ SF P IR+WN LP ST+ DT L
Sbjct: 630 FKESFFPHAIRMWNGLPVSTITQPTIDTFL 659
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 435 FQRSFLPRTIRLWNELP-STVFPERYDTSL 521
F+ SF P IR+WN LP ST+ DT L
Sbjct: 212 FKESFFPHAIRMWNGLPVSTITQPTIDTFL 241
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 435 FQRSFLPRTIRLWNELPS 488
++ S+ PRT++LWN LPS
Sbjct: 249 YRNSYFPRTVKLWNSLPS 266
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWNELPSTV 494
L+S+ + + SF R IR+WN LPS V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 363 RIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELP 485
R R HP ++E L T F+ SF RTI+ WN+LP
Sbjct: 345 RRTRQLRSSHPDKFIE-LCPRTEAFKNSFFCRTIKEWNKLP 384
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 363 RIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTIRLWNELP 485
R R HP ++E L +T ++ SF RTI+ WN+LP
Sbjct: 236 RRTRQLRSSHPDKFIE-LCPTTEAYKNSFFCRTIKEWNKLP 275
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 435 FQRSFLPRTIRLWNELPSTVFP 500
F SF RTI +WN LP VFP
Sbjct: 826 FLFSFYSRTIPVWNALPQAVFP 847
>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
Length = 592
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 13 SQFNVHRQNICMTKRIMCVC----VFIYLFYC*KKSMLYFLYMDLYVYVSWSACPRVS 174
S VHR + T ++ C V+++ F C + S+L F +D VYV +C V+
Sbjct: 438 SHVYVHRISCLRTSNLVFTCIESRVYVHRFSCLRSSILVFTCIDSRVYVHRFSCLSVN 495
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 474 NELPSTVFPERYDTSLFKRGLWRVLSGRQRAWL 572
N L T PE DT+ FK+ L R+ +G ++ WL
Sbjct: 174 NVLKLTSGPEDVDTTKFKKTLARLANGDEKGWL 206
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 444 SFLPRTIRLWNELPSTVFPERYDTSLFKRGL 536
SF PRTIR WN LP+ + E FKR L
Sbjct: 786 SFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 815
>SB_36832| Best HMM Match : DTHCT (HMM E-Value=9.3)
Length = 225
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 345 TSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQR 443
TS+ YH H SR H YY +++ TV FQ+
Sbjct: 170 TSQLYH----HHSRYHNRYYFSSMKTITVTFQK 198
>SB_44561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 168 AGTRTPTHIYIQVHIKEIQHTFFLTIK*INKHTH 67
+GT T +H+ Q+HI+ H + N H+H
Sbjct: 105 SGTNTHSHLVAQIHIRIEWHKYTFAFSGTNTHSH 138
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 168 AGTRTPTHIYIQVHIKEIQHTFFLTIK*INKHTH 67
+GT T +H+ Q+HI+ H + N H+H
Sbjct: 131 SGTNTHSHLVAQIHIRIEWHKYTFAFTGTNTHSH 164
>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
Length = 447
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 370 PATGVEFIHTTTWSHCGHPQCVSRDLFC 453
P TG+ +I TTTW G PQ D+ C
Sbjct: 39 PDTGI-WIETTTWHEIGRPQVHGYDMQC 65
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFDMSFIPRTIRTWN 124
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
Frame = +3
Query: 315 CSEELFEM--IPTSRFYHRIARHRS------RVHPYYY 404
CS F + P+S FY+R+ RH R HP+YY
Sbjct: 1229 CSPSSFSLPCSPSSSFYYRVLRHHPFHYRVLRHHPFYY 1266
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 398 LQANVNAFGMSFIPRTIRTWN 418
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 467 LQANVNAFGMSFIPRTIRTWN 487
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 208 LQANVNAFGMSFIPRTIRTWN 228
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 837 LQANVNAFGMSFIPRTIRTWN 857
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 442 LQANVNAFGMSFIPRTIRTWN 462
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 414 LRSSTVRFQRSFLPRTIRLWN 476
L+++ F SF+PRTIR WN
Sbjct: 55 LQANVNAFGMSFIPRTIRTWN 75
>SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)
Length = 1332
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 321 EELFEMIPTSRFYHRIARHRSRVHPYYYVEPLRSSTVRFQRSFLPRTI 464
+EL E+I T+ +R R R P YYVE L+S+ ++ + L T+
Sbjct: 511 QELAEIIDTAISQSTKSRKR-RSSPEYYVEILKSTAIKDESKTLLTTV 557
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 451 CHVPSGYGMSSPPRCFPSAMTRPSSNEAC 537
C P GY + +P RC S + SS AC
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFAC 2175
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 402 YVEPLRSSTVRFQRSFLPRTIRLWNELP 485
Y P S+ ++SF P TIR WN LP
Sbjct: 203 YKVPPSSTDYHKKKSFFPPTIRDWNCLP 230
>SB_21364| Best HMM Match : Homeobox (HMM E-Value=0.27)
Length = 118
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 244 VVAIKDSLISFIYRLTSPREGEGARRGDTHSNSHIHTSPYKGNTTYFFSNN--KINK*TH 71
VV + L+ + +G+G G H+N H H K T ++N K+++ TH
Sbjct: 10 VVMVMMMLVMVVKVCGDDGDGDGDGDGFCHANYHCHEYKVKHATRASMADNIYKVSRATH 69
Query: 70 T 68
T
Sbjct: 70 T 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,474,404
Number of Sequences: 59808
Number of extensions: 523539
Number of successful extensions: 1787
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -