Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30243
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.7  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   6.3  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 346 HLAFTIA-SPATGVEFIHTTTWSHCGHPQCVSRDL 447
           H+  T+A S A+GV  +HT  +   G P    RD+
Sbjct: 354 HMLKTLAHSLASGVAHLHTEIFGTPGKPSIAHRDI 388


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLGSAPGIAEVHG 600
           PSG     P      A +  S   A   Y   GSG+ S P  A +HG
Sbjct: 843 PSGGTTPVPVSLLSPASSHYSQRSARSPYGGCGSGIASPP--AAIHG 887


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 360  GKSEMSVSSRTIPQSTCRSRTKYITG*VIFFRHFCIRRTLSQ 235
            G S  S+   TI Q         + G V ++RH  +R+TL++
Sbjct: 1517 GISTSSLFGATILQLQATDEDDGLNGLVRYYRHGEVRKTLAE 1558


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,514
Number of Sequences: 2352
Number of extensions: 18095
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)