Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30241
(333 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018256-1|BAA34433.1| 945|Homo sapiens KIAA0713 protein protein. 29 2.6
U68567-1|AAC50812.1| 988|Homo sapiens lysosomal acid alpha-mann... 28 7.9
U68382-1|AAC50811.1| 323|Homo sapiens truncated lysosomal acid ... 28 7.9
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida... 28 7.9
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida... 28 7.9
U05572-1|AAB03816.1| 987|Homo sapiens alpha-mannosidase protein. 28 7.9
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla... 28 7.9
AY358328-1|AAQ88694.1| 1115|Homo sapiens BOC protein. 28 7.9
AY027658-1|AAK14795.1| 1114|Homo sapiens brother of CDO protein. 28 7.9
AK090455-1|BAC03436.1| 931|Homo sapiens FLJ00376 protein protein. 28 7.9
AK074556-1|BAC11057.1| 789|Homo sapiens protein ( Homo sapiens ... 28 7.9
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla... 28 7.9
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 28 7.9
>AB018256-1|BAA34433.1| 945|Homo sapiens KIAA0713 protein protein.
Length = 945
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 200 VQNHSYVASRVRSPRSLHSIARLNNNRARTYDHGTITRARREIN 331
VQ H+Y++ V + +++A + N+ +TY IT RR +N
Sbjct: 616 VQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRNLN 659
>U68567-1|AAC50812.1| 988|Homo sapiens lysosomal acid
alpha-mannosidase protein.
Length = 988
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 11 PLCFFLLLLAAAGARAGGYETC 32
>U68382-1|AAC50811.1| 323|Homo sapiens truncated lysosomal acid
alpha-mannosidase protein.
Length = 323
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 11 PLCFFLLLLAAAGARAGGYETC 32
>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
protein.
Length = 1010
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 33 PLCFFLLLLAAAGARAGGYETC 54
>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
protein.
Length = 1011
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 34 PLCFFLLLLAAAGARAGGYETC 55
>U05572-1|AAB03816.1| 987|Homo sapiens alpha-mannosidase protein.
Length = 987
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 11 PLCFFLLLLAAAGARAGGYETC 32
>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
2B, member 1 protein.
Length = 1011
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 34 PLCFFLLLLAAAGARAGGYETC 55
>AY358328-1|AAQ88694.1| 1115|Homo sapiens BOC protein.
Length = 1115
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 18 LVLSSPHLTRTVHSHLKWRNAHKQQGRS 101
++LSSP ++T L WR H+ GR+
Sbjct: 476 IILSSPRTSKTDSYELVWRPRHEGSGRA 503
>AY027658-1|AAK14795.1| 1114|Homo sapiens brother of CDO protein.
Length = 1114
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 18 LVLSSPHLTRTVHSHLKWRNAHKQQGRS 101
++LSSP ++T L WR H+ GR+
Sbjct: 476 IILSSPRTSKTDSYELVWRPRHEGSGRA 503
>AK090455-1|BAC03436.1| 931|Homo sapiens FLJ00376 protein protein.
Length = 931
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 18 LVLSSPHLTRTVHSHLKWRNAHKQQGRS 101
++LSSP ++T L WR H+ GR+
Sbjct: 293 IILSSPRTSKTDSYELVWRPRHEGSGRA 320
>AK074556-1|BAC11057.1| 789|Homo sapiens protein ( Homo sapiens
cDNA FLJ90075 fis, clone HEMBA1004391, weakly similar to
TUMOR SUPPRESSOR PROTEIN DCC PRECURSOR. ).
Length = 789
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 18 LVLSSPHLTRTVHSHLKWRNAHKQQGRS 101
++LSSP ++T L WR H+ GR+
Sbjct: 150 IILSSPRTSKTDSYELVWRPRHEGSGRA 177
>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
2B, member 1 precursor variant protein.
Length = 1007
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 108 PMCFFLVVCERS-ATSGGYERC 46
P+CFFL++ + A +GGYE C
Sbjct: 30 PLCFFLLLLAAAGARAGGYETC 51
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 77 RSQTTRKKHIGSSPNQIYATSKRLNHQRQHDEKRGQR*RQGVQNHSYVASRVRSPRSLHS 256
RS + +++H SSP SKR + +R + R + + H SR +S S S
Sbjct: 243 RSFSKKRRHSSSSPK-----SKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPS 297
Query: 257 IARLNNNRARTYDHGTITRAR 319
+ +R R+ + G +R R
Sbjct: 298 SCE-SRHRGRSPEEGQKSRRR 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,147,531
Number of Sequences: 237096
Number of extensions: 663431
Number of successful extensions: 1593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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