Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30237
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    26   0.88 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   4.7  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   6.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.2  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
           +VL+N     Y   YKS +++    ++ + PP +Y
Sbjct: 113 IVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIY 147


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 168 TIVNYSHLITSKLEKFERVRLNHIELI 248
           T+VNY+ L+ +   ++  V   HI L+
Sbjct: 116 TLVNYASLMATNAARYRMVAGKHIHLL 142


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 10  GSSRASFVSQWAGYNGCLGPG 72
           G+    F+     Y GC+GPG
Sbjct: 519 GTYEQHFIPHAMAYAGCIGPG 539


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 142 NTNSQYIRWAH 110
           N  S+Y+RWAH
Sbjct: 896 NNTSRYLRWAH 906


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 31  VSQWAGYNGCLG 66
           +S+W  ++GC+G
Sbjct: 642 ISEWCSFHGCMG 653


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,893
Number of Sequences: 2352
Number of extensions: 13069
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)