Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30237
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542282-1|CAG47077.1|  313|Homo sapiens alpha; complete cds, wi...    30   6.0  
CR533517-1|CAG38548.1|  313|Homo sapiens alpha; complete cds, in...    30   6.0  
BC008885-1|AAH08885.1|  313|Homo sapiens small glutamine-rich te...    30   6.0  
BC005165-1|AAH05165.1|  313|Homo sapiens small glutamine-rich te...    30   6.0  
BC002989-1|AAH02989.2|  313|Homo sapiens small glutamine-rich te...    30   6.0  
BC000390-1|AAH00390.1|  313|Homo sapiens small glutamine-rich te...    30   6.0  
AJ223828-1|CAA11565.1|  313|Homo sapiens small glutamine-rich te...    30   6.0  
AJ133129-1|CAB39725.1|  313|Homo sapiens small glutamine-rich te...    30   6.0  
AF408399-1|AAL01051.1|  313|Homo sapiens TPR-containing co-chape...    30   6.0  
AF368279-1|AAP29457.1|  313|Homo sapiens small glutamine rich pr...    30   6.0  
AC006538-2|AAD13117.1|  313|Homo sapiens small glutamine-rich te...    30   6.0  
AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.              30   8.0  

>CR542282-1|CAG47077.1|  313|Homo sapiens alpha; complete cds,
           without stopcodon.   protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>CR533517-1|CAG38548.1|  313|Homo sapiens alpha; complete cds, incl.
           stopcodon.   protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>BC008885-1|AAH08885.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>BC005165-1|AAH05165.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>BC002989-1|AAH02989.2|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>BC000390-1|AAH00390.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat (TPR)-containing, alpha
           protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>AJ223828-1|CAA11565.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide (SGT) protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>AJ133129-1|CAB39725.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide repeat containing protein protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>AF408399-1|AAL01051.1|  313|Homo sapiens TPR-containing
           co-chaperone protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>AF368279-1|AAP29457.1|  313|Homo sapiens small glutamine rich
           protein with tetratricopeptide repeats 1 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>AC006538-2|AAD13117.1|  313|Homo sapiens small glutamine-rich
           tetratricopeptide (SGT) protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 553 LTLRPTTSVYACRAIRERSPLPSTSSAVRDGVALVCADASRSRHLYVLCIGILSLN 386
           + L P  +VY C      S L + + AV+D    +C D + S+    + + + SLN
Sbjct: 118 IELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN 173


>AF402000-1|AAM73764.1| 2542|Homo sapiens talin 2 protein.
          Length = 2542

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 553 LTLRPTTSVY-ACRAIRERSPLPSTSSAVRDGVAL 452
           +   P+T+VY ACR IRER P   T  A   G+ L
Sbjct: 19  MQFEPSTAVYDACRVIRERVPEAQTGQASDYGLFL 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,890,523
Number of Sequences: 237096
Number of extensions: 2056529
Number of successful extensions: 3775
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3775
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)