Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30237
(639 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 28 0.088
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 4.4
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 22 5.8
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 22 5.8
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 22 5.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.9 bits (59), Expect = 0.088
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+VL+N Y YKS +++ D+ + PP +Y
Sbjct: 113 IVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIY 147
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+++YN + Y++ +VV Y PP ++
Sbjct: 141 ILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIF 175
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+++YN + Y++ +VV Y PP ++
Sbjct: 141 ILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIF 175
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVYMHVERLENA 499
+++YN + Y++ +VV Y PP ++ +++ A
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVA 116
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVYMHVERLENA 499
+++YN + Y++ +VV Y PP ++ +++ A
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIA 116
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVYMHVERLENA 499
+++YN + Y++ +VV Y PP ++ +++ A
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIA 116
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+++YN + Y++ +VV Y PP ++
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIF 107
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+++YN + Y++ +VV Y PP ++
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIF 107
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+++YN + Y++ +VV Y PP ++
Sbjct: 73 ILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIF 107
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+VLYN Y ++ + D+ + PP +Y
Sbjct: 120 IVLYNNADGNYEVTLMTKATLKYTGDVSWKPPAIY 154
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 330 LLKLCYPLI*LRHTQIITLLKFII 259
LLK YPL+ +II +L+FI+
Sbjct: 36 LLKKEYPLVMDTKLKIIEILQFIL 59
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 171 IVNYSHLITSKLEKFERVRLNHIEL 245
+ NYS IT LEK ++ + I+L
Sbjct: 72 LTNYSCFITCALEKSHIIQNDEIQL 96
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 330 LLKLCYPLI*LRHTQIITLLKFII 259
LLK YPL+ +II +L+FI+
Sbjct: 4 LLKKEYPLVMDTKLKIIEILQFIL 27
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/35 (22%), Positives = 16/35 (45%)
Frame = -1
Query: 630 LVLYNGCPTLYTRIYKSRMVVPAGADLHYAPPPVY 526
+++YN + Y + +VV Y PP ++
Sbjct: 110 VLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIF 144
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,752
Number of Sequences: 438
Number of extensions: 4139
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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