Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30236
(690 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UKX7 Cluster: Nucleoporin 50 kDa; n=32; Tetrapoda|Rep... 87 3e-16
UniRef50_UPI0000519BC0 Cluster: PREDICTED: similar to CG2158-PA;... 71 3e-11
UniRef50_Q6AYL1 Cluster: Npap60 protein; n=1; Rattus norvegicus|... 61 3e-08
UniRef50_UPI0000D55DED Cluster: PREDICTED: similar to CG2158-PA;... 58 2e-07
UniRef50_Q7ZTU8 Cluster: Nup50 protein; n=6; Euteleostomi|Rep: N... 56 6e-07
UniRef50_Q5BZP1 Cluster: SJCHGC05722 protein; n=1; Schistosoma j... 56 1e-06
UniRef50_Q4THE6 Cluster: Chromosome undetermined SCAF2991, whole... 55 1e-06
UniRef50_Q4T8W9 Cluster: Chromosome undetermined SCAF7713, whole... 54 2e-06
UniRef50_Q7Q886 Cluster: ENSANGP00000005170; n=1; Anopheles gamb... 54 3e-06
UniRef50_Q0IFF1 Cluster: Nucleoporin; n=1; Aedes aegypti|Rep: Nu... 53 6e-06
UniRef50_A7SQ74 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04
UniRef50_Q7K0D8 Cluster: LD27030p; n=2; Sophophora|Rep: LD27030p... 45 0.002
UniRef50_O49900 Cluster: MtN14 protein; n=1; Medicago truncatula... 38 0.31
UniRef50_A2G037 Cluster: Putative uncharacterized protein; n=1; ... 37 0.40
UniRef50_UPI0000D5699D Cluster: PREDICTED: similar to myosin Va;... 36 0.71
UniRef50_Q7RSY0 Cluster: CCAAT-box DNA binding protein subunit B... 36 0.71
UniRef50_Q9USL4 Cluster: Nucleoporin nup61; n=1; Schizosaccharom... 36 0.93
UniRef50_Q7RN55 Cluster: Putative uncharacterized protein PY0196... 36 1.2
UniRef50_A5UM90 Cluster: Adhesin-like protein; n=1; Methanobrevi... 36 1.2
UniRef50_Q45QP0 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_A2FF51 Cluster: Protein kinase, putative; n=1; Trichomo... 35 1.6
UniRef50_A2E755 Cluster: Dynein heavy chain family protein; n=2;... 35 1.6
UniRef50_UPI0000E4829E Cluster: PREDICTED: hypothetical protein;... 34 2.9
UniRef50_A6LEU4 Cluster: Rod shape-determining protein rodA; n=1... 34 2.9
UniRef50_UPI00006CBE2F Cluster: Inositol monophosphatase family ... 34 3.8
UniRef50_Q5CVD5 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_A0DBQ3 Cluster: Chromosome undetermined scaffold_44, wh... 34 3.8
UniRef50_Q04HD0 Cluster: Permease of the major facilitator super... 33 5.0
UniRef50_A4M8J2 Cluster: Putative uncharacterized protein precur... 33 5.0
UniRef50_A7AML9 Cluster: Variant erythrocyte surface antigen-1, ... 33 5.0
UniRef50_Q5R1T0 Cluster: Chromatin assembly factor-1p150; n=6; A... 33 6.6
UniRef50_Q1A4I6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q3Y5Y5 Cluster: Int; n=3; Leptospira interrogans|Rep: I... 33 6.6
UniRef50_A5E5M4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_UPI000150A711 Cluster: TPR Domain containing protein; n... 33 8.7
UniRef50_UPI0000499F64 Cluster: hypothetical protein 5.t00035; n... 33 8.7
UniRef50_Q6PHJ5 Cluster: Zgc:65960; n=5; cellular organisms|Rep:... 33 8.7
UniRef50_Q2NDZ8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q9FLC1 Cluster: Genomic DNA, chromosome 5, TAC clone:K1... 33 8.7
UniRef50_Q6YY15 Cluster: Putative uncharacterized protein OSJNBb... 33 8.7
UniRef50_Q8T3T3 Cluster: Thrombospondin-related protein-1; n=1; ... 33 8.7
UniRef50_Q7PWG9 Cluster: ENSANGP00000006494; n=2; cellular organ... 33 8.7
UniRef50_Q5KJA8 Cluster: Retrograde transport, endosome to Golgi... 33 8.7
>UniRef50_Q9UKX7 Cluster: Nucleoporin 50 kDa; n=32; Tetrapoda|Rep:
Nucleoporin 50 kDa - Homo sapiens (Human)
Length = 468
Score = 87.4 bits (207), Expect = 3e-16
Identities = 63/214 (29%), Positives = 96/214 (44%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETK 226
LN S+ DWI KHV+ PLC LTPIF+DYE YL I E+ HG G SE E+ K V +ET+
Sbjct: 163 LNCSVRDWIVKHVNTNPLCDLTPIFKDYEKYLANI-EQQHGNSGRNSESESNK-VAAETQ 220
Query: 227 NPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTA 406
+P + ES+ G+ K + + + LG F+FG
Sbjct: 221 SPSLFGSTKLQQEST--FLFHGNKTEDTPDKKMEVASEKKTDPSSLGATSASFNFGKKVD 278
Query: 407 TSTINSIPAIXXXXXXXXXXXXXXXXXXXXXFSFGLKSSPSSDGSPLKFGAPSLTSTNTN 586
+S + S+ ++ +S P S P K ++
Sbjct: 279 SSVLGSLSSVPLTGFSFSPGNSSLFGKDT------TQSKPVSSPFPTK-PLEGQAEGDSG 331
Query: 587 NTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 688
+ ++E+ D PPKV T + EE++ + K+CK+
Sbjct: 332 ECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKL 365
>UniRef50_UPI0000519BC0 Cluster: PREDICTED: similar to CG2158-PA;
n=2; Apocrita|Rep: PREDICTED: similar to CG2158-PA -
Apis mellifera
Length = 527
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Frame = +2
Query: 44 GLNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPD----GDCSEIETKKNV 211
GLNES++ WIK HVD P CILTPIF+DYE YLKEI E HG + I + N
Sbjct: 157 GLNESVAQWIKTHVDANPFCILTPIFKDYEKYLKEI-ESKHGNEIEKSSQAQSIHSSDNK 215
Query: 212 NS-ETKNPVEKSKNGIFSESS 271
S T+ +E S G+ + S
Sbjct: 216 ESTNTEKKLESSPFGVTNSKS 236
Score = 54.4 bits (125), Expect = 2e-06
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Frame = +2
Query: 194 ETKKNV--NSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDP--SKPFSTTPLSSSCNM 361
+T K++ N++ + ++KS G + S + GSS + +P SKP + S
Sbjct: 269 DTGKSIFSNTDQSSDIQKSVFGNIDQKSGSKNIFGSSNSEKNPFLSKPSIASDKSDEQET 328
Query: 362 -LGDKPKGFSFGINTATSTINSIPAIXXXXXXXXXXXXXXXXXXXXXFSFGLKSSPSSDG 538
L K + I + T+TI S A FSFG
Sbjct: 329 KLDSKSTTVTTSIASTTTTIASSFATTNTTTFCFGQSSATNNTSTG-FSFG-------ST 380
Query: 539 SPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCKV 688
P FGA + ++E + EDE+ PPKVEF P+ EE +++++RCKV
Sbjct: 381 KPFTFGAQVVKPQEPEDSEGKDDEDEE-PPKVEFKPVTEEGAIYEQRCKV 429
>UniRef50_Q6AYL1 Cluster: Npap60 protein; n=1; Rattus
norvegicus|Rep: Npap60 protein - Rattus norvegicus (Rat)
Length = 436
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +2
Query: 44 GLNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNV 211
GLN S+ DWI KHV+ P C LTP+F+ YE YL I+++ H G SE E +++
Sbjct: 150 GLNCSVRDWIVKHVNANPFCDLTPVFKQYEKYLAAIEKQLHSSCGCLSESEPNRDL 205
>UniRef50_UPI0000D55DED Cluster: PREDICTED: similar to CG2158-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG2158-PA - Tribolium castaneum
Length = 365
Score = 58.0 bits (134), Expect = 2e-07
Identities = 42/130 (32%), Positives = 56/130 (43%)
Frame = +2
Query: 299 IFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINSIPAIXXXXXXXXXXXXXX 478
I +L+ +K + + S+S GFSFG +T T + S +
Sbjct: 149 INELEKAKGEAASETSTSATTAPQFSFGFSFGSSTTTVSFTSSTSTATLSGGDSSFKSQP 208
Query: 479 XXXXXXXFSFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEE 658
FSFG S S KF S + +P QEDED PPKVEFTP+ EE
Sbjct: 209 -------FSFGNSGSDSG-----KFSFTSTVIKLADEPKPQEQEDEDEPPKVEFTPVVEE 256
Query: 659 NSVFDKRCKV 688
++ RCKV
Sbjct: 257 GHIYSIRCKV 266
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +2
Query: 44 GLNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSET 223
GLNES+++WIKKHV P L PIF+DY+ Y+ E+++ + S T S
Sbjct: 117 GLNESVTEWIKKHVSSNPFINLQPIFKDYDKYINELEKAKGEAASETSTSATTAPQFSFG 176
Query: 224 KNPVEKSKNGIFSESSRDLTVS-GSSIFKLDPSKPFS 331
+ + F+ S+ T+S G S FK S+PFS
Sbjct: 177 FSFGSSTTTVSFTSSTSTATLSGGDSSFK---SQPFS 210
>UniRef50_Q7ZTU8 Cluster: Nup50 protein; n=6; Euteleostomi|Rep:
Nup50 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 421
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/68 (42%), Positives = 36/68 (52%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETK 226
LN S+ DWI KHV++ PLC L PIFRDYE +L I+ +Y G E K +
Sbjct: 151 LNCSVRDWITKHVNDNPLCDLNPIFRDYERHLASIERKY--GSGAADETPGKPLASCAAA 208
Query: 227 NPVEKSKN 250
P KN
Sbjct: 209 PPTVSLKN 216
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 500 FSFGLKSSPSSD-GSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDK 676
FSF SS S+ GS + +P + S + + T N ED + PP I E+++ + K
Sbjct: 256 FSFSSSSSSSAVFGSAVSSVSPVVNSDSNSQTADENGEDSEEPPVPVVKEIKEKDAFYSK 315
Query: 677 RCKV 688
+CK+
Sbjct: 316 KCKL 319
>UniRef50_Q5BZP1 Cluster: SJCHGC05722 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05722 protein - Schistosoma
japonicum (Blood fluke)
Length = 200
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEY--HGPDGDCSEIETKKNVNSE 220
LN++L DWI KH+ E P CIL+PIF DY +L EI ++ H G + E K+
Sbjct: 108 LNQNLLDWITKHIKEDPYCILSPIFSDYNKHLSEINSKFPEHSLVGSATVPEKKEPSGCL 167
Query: 221 TKNPVEKSKNGIFSES 268
N + ++ + S S
Sbjct: 168 ATNTSKVTETSVTSVS 183
>UniRef50_Q4THE6 Cluster: Chromosome undetermined SCAF2991, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2991,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 379
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEY 163
LN S+ DWI KHVD+ PLC L PIFRDYE +L I+ +
Sbjct: 142 LNCSVRDWIAKHVDDNPLCDLNPIFRDYERHLATIERRH 180
>UniRef50_Q4T8W9 Cluster: Chromosome undetermined SCAF7713, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7713, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQ 154
LN S+ DWI KHVD+ PLC L PIFRDYE +L I+
Sbjct: 126 LNCSVRDWIAKHVDDNPLCDLNPIFRDYERHLATIE 161
>UniRef50_Q7Q886 Cluster: ENSANGP00000005170; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000005170 - Anopheles gambiae
str. PEST
Length = 573
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +2
Query: 500 FSFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 679
F+FG S P S G+ + + STN T P+ E PPKVEFTP+ E++SV+ KR
Sbjct: 420 FTFGSSSKPFSFGT---LASSTSASTNATTTTPSTDE----PPKVEFTPVEEKDSVYSKR 472
Query: 680 CKV 688
CK+
Sbjct: 473 CKL 475
>UniRef50_Q0IFF1 Cluster: Nucleoporin; n=1; Aedes aegypti|Rep:
Nucleoporin - Aedes aegypti (Yellowfever mosquito)
Length = 412
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEE 160
LN+S++ WI V E PLC LTPIF+DYE YL EI+ +
Sbjct: 174 LNQSVATWISDKVKENPLCKLTPIFKDYEKYLTEIESK 211
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +2
Query: 500 FSFGLKSSPS-SDGSPLKFG---APSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSV 667
FSFG+ +S + S G+ F P+L + + E + D+D PPKVEFTP+ E++S+
Sbjct: 250 FSFGIGASTAPSTGTGFTFANVKPPALEQKSDDKEE--GEADDDEPPKVEFTPVEEKDSL 307
Query: 668 FDKRCKV 688
+ KRCK+
Sbjct: 308 YSKRCKL 314
>UniRef50_A7SQ74 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 438
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQ 154
LN+ +SDW++KHV P LTP+F DY ++KEI+
Sbjct: 169 LNQGVSDWVQKHVTSNPYIDLTPVFDDYRKHMKEIE 204
>UniRef50_Q7K0D8 Cluster: LD27030p; n=2; Sophophora|Rep: LD27030p -
Drosophila melanogaster (Fruit fly)
Length = 564
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETK 226
LN S+ +++ + ++P CILTP+F++Y+ +LK++Q+E E+ + ++++K
Sbjct: 202 LNRSVIKFLQDQMGKSPYCILTPVFKNYDEHLKDLQDE-----------ESARTNSTKSK 250
Query: 227 NPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPKG--FSFGIN 400
+S+ + S ++ F KP + P+ +S + L KP S G
Sbjct: 251 TAQARSQEPVAKVSRASSPPKAATTFTF--GKP--SAPIGASVSPLAKKPNCTITSGGTT 306
Query: 401 TATST 415
T T+T
Sbjct: 307 TTTAT 311
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/32 (53%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +2
Query: 596 PANQE-DEDVPPKVEFTPIAEENSVFDKRCKV 688
PA +E +ED PPKVEF + E+++++ KRCKV
Sbjct: 435 PAEEEKEEDTPPKVEFKQVVEDDAIYSKRCKV 466
>UniRef50_O49900 Cluster: MtN14 protein; n=1; Medicago
truncatula|Rep: MtN14 protein - Medicago truncatula
(Barrel medic)
Length = 142
Score = 37.5 bits (83), Expect = 0.31
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 131 EAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKL 310
+A KE+ +E P D E ETKK +ETK PVE++K S + + +G S+ +
Sbjct: 4 KAETKEVVQEVVVPVKDTEE-ETKKEEQTETKEPVEETKENGNSLNVEETKENGDSVVEA 62
Query: 311 DPSKP 325
KP
Sbjct: 63 VQEKP 67
>UniRef50_A2G037 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1110
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 515 KSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFT-PIAEENSV 667
+++ +++ P FG T+TN +TE QED D+PP T P ++EN+V
Sbjct: 490 ENTTNNEDLPPGFGQTETTNTNNASTEANAQEDNDLPPGFGSTDPKSQENNV 541
>UniRef50_UPI0000D5699D Cluster: PREDICTED: similar to myosin Va; n=3;
Endopterygota|Rep: PREDICTED: similar to myosin Va -
Tribolium castaneum
Length = 1832
Score = 36.3 bits (80), Expect = 0.71
Identities = 30/94 (31%), Positives = 46/94 (48%)
Frame = +2
Query: 71 IKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKN 250
+K ++E + IL D EAY K +QE YH + C E+E K +N++++N +N
Sbjct: 1044 LKVRLEEEKMLILNEQDSDREAYQKLLQE-YHCLEQHCEELE--KQLNNQSQNQSSHRRN 1100
Query: 251 GIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSS 352
+ SS D V S I + +T SSS
Sbjct: 1101 -VSDLSSIDSFVINSDIAEDHGYGSVRSTTTSSS 1133
>UniRef50_Q7RSY0 Cluster: CCAAT-box DNA binding protein subunit B;
n=4; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
protein subunit B - Plasmodium yoelii yoelii
Length = 1062
Score = 36.3 bits (80), Expect = 0.71
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 53 ESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEI-ETKKNVNSETKN 229
E L + IKK +ETPL IL I+ Y+ LK +Q E + + S+I K + + KN
Sbjct: 562 EVLKEIIKKKKNETPLIILPKIYH-YKNSLKYLQGERENEEENNSDIFIPNKTIKIKKKN 620
Query: 230 PVEKSKNGIFSESSRD 277
+ + KN ++ D
Sbjct: 621 IMSQGKNDSKNDRKND 636
>UniRef50_Q9USL4 Cluster: Nucleoporin nup61; n=1;
Schizosaccharomyces pombe|Rep: Nucleoporin nup61 -
Schizosaccharomyces pombe (Fission yeast)
Length = 565
Score = 35.9 bits (79), Expect = 0.93
Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Frame = +2
Query: 44 GLNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETK--KNVNS 217
GLN+S D + K VD P L+P+F +Y + I+++ +G+ + T NV
Sbjct: 98 GLNKSFIDAVIKSVDNNPFGNLSPLFDEYRQHFSSIEKK--PAEGNAFIVSTSFLSNVFL 155
Query: 218 E--TKNPVEKSKN---GIFSESSRDLTVSGSSIFKLDPSKP----------FSTTPLSSS 352
E T N V N +SS +T +S K D KP FS L SS
Sbjct: 156 EQPTSNAVVSEVNPQQQKSQDSSSFVTEKPASSEKEDKEKPLVPPGAPRFGFSAPALGSS 215
Query: 353 --CNMLGDKPKGFSFGINTAT 409
N PKG SFG +AT
Sbjct: 216 FQFNSSAFTPKG-SFGEKSAT 235
>UniRef50_Q7RN55 Cluster: Putative uncharacterized protein PY01969;
n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01969 - Plasmodium yoelii yoelii
Length = 1491
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 149 IQEEYHGPDGDCSEIETKKNVNSETKN-PVEKSKNGIFSESSRDLTV 286
+Q++ H + D E E KKN+N+ TKN + K+ + SE+S+D+ V
Sbjct: 289 VQKKVHTIENDIEEAE-KKNINTSTKNTDIHKNTSFYHSENSKDIIV 334
>UniRef50_A5UM90 Cluster: Adhesin-like protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Adhesin-like
protein - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 2101
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 176 GDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSC 355
GDCS + +K ++ KNP + + +F +S+ +S + F +D K + T ++S
Sbjct: 207 GDCSVVNSKLIISYSNKNPAIYNFHNLFVNNSQTFGISSNPNFDVDIFKSITMTVINSKV 266
Query: 356 NML 364
L
Sbjct: 267 GQL 269
>UniRef50_Q45QP0 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria sp. China
Length = 884
Score = 35.1 bits (77), Expect = 1.6
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +2
Query: 143 KEIQEEYHGPDGDCSEIETKKNVNSETKNPVEK--SKNGIFSESSRDLTVSGSSIFKLDP 316
K+I++ + +GDC E E KK +E K P+ K S ++ I K+ P
Sbjct: 689 KQIRQLFEDDNGDCDEDEEKKKKEAEKKLPITKTPSTPATIPVTTPGTPTKVKPISKI-P 747
Query: 317 SKPFSTTPLSS-SCNMLGDKPKGFSFGINTATSTINSIP 430
KP P+S +KP G T ++ IP
Sbjct: 748 GKPTKVKPVSKIPIRPKNEKPLSKIPGKPTMVKPVSKIP 786
>UniRef50_A2FF51 Cluster: Protein kinase, putative; n=1; Trichomonas
vaginalis G3|Rep: Protein kinase, putative - Trichomonas
vaginalis G3
Length = 984
Score = 35.1 bits (77), Expect = 1.6
Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 12/147 (8%)
Frame = +2
Query: 281 TVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINSIPAI-XXXXXXX 457
T++ ++ + DP PF+T + ++ N D F G A +N + A
Sbjct: 552 TIASTTTTQQDPDNPFATNKVITAANTASDI---FGSGSANAAPQVNKVTAANTDDDIFG 608
Query: 458 XXXXXXXXXXXXXXFSFGLKSSPSSDGSPLKFGAPS-------LTSTNTNNTEPANQEDE 616
S L ++P+ +P+ PS +S+ ++PAN +
Sbjct: 609 DLSTPKPSPTSSVAVSISLSNTPAPAPAPVAKPPPSTNDAFDPFSSSFIGGSKPANTNNS 668
Query: 617 DVPPKVEFT----PIAEENSVFDKRCK 685
PP ++F+ P SVFD+ K
Sbjct: 669 QKPPTIDFSMDTKPSQPSTSVFDRPSK 695
>UniRef50_A2E755 Cluster: Dynein heavy chain family protein; n=2;
Eukaryota|Rep: Dynein heavy chain family protein -
Trichomonas vaginalis G3
Length = 4660
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = -1
Query: 540 EPSEDGLDFNPKEKVFDVCILLEFVDEVPKENPVLIAGMLFIVLVAVFIPKENPFGLSPS 361
EP E + +P E CIL + ++ KEN ++ LVA I +P S
Sbjct: 61 EPLEMTVSDDPSEYPGKSCILTPYFLKIEKENKQALSNNNIDQLVAAGIIAGDPISSFNS 120
Query: 360 ILQELLNGVVENGLDGSNLNID 295
+ + +GV+ LD ++ ID
Sbjct: 121 MFSKSYSGVIRTALDSADEGID 142
>UniRef50_UPI0000E4829E Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 661
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 185 SEIETKKNVNSETKN----PVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSS 352
+E+ET+K + ETK PV K++ G SS S S K+ S+P S+TP S
Sbjct: 337 NEVETRKRMTGETKKGKTKPVGKTQEGRKKRSSVSSNSSKQSNRKVPSSEPASSTPQQGS 396
>UniRef50_A6LEU4 Cluster: Rod shape-determining protein rodA; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Rod
shape-determining protein rodA - Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 435
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = -1
Query: 519 DFNPKEKVFDVCILLEFVDEVPKENPVLIAGMLFIVLVA-VFIPKENPFGLSPSILQELL 343
+F+ +F VC L+ F+ ++P +AG+L + LV + + K P ++ + +
Sbjct: 158 NFSTAFMLFGVCFLMMFIGQLPFGKLAKLAGILMLALVLFLALLKFTPAAITQYLPDRFV 217
Query: 342 --NGVVENGLDGSNLNIDDPDTVRSLLDSEKI 253
G +E DG N+D+ T + D+ ++
Sbjct: 218 TWQGRLERFFDGHKDNLDESGTYKITDDNYQV 249
>UniRef50_UPI00006CBE2F Cluster: Inositol monophosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Inositol monophosphatase family protein - Tetrahymena
thermophila SB210
Length = 835
Score = 33.9 bits (74), Expect = 3.8
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +2
Query: 125 DYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETK-----NPVEKSKNGIFSESSRDLTVS 289
D E Y KEIQ+ Y + D +IE + + ETK ++KS+NG + + D + +
Sbjct: 141 DEEDYQKEIQQFYQRMENDKLKIEEENKMKEETKRLKKLRRLQKSQNGDYLDERDDDSDN 200
Query: 290 GSSIFKLDPS--KPFSTTPLSSSCNMLGDK 373
SI + FS + +SS+ + D+
Sbjct: 201 EDSISSKSSNLGSDFSDSSISSNSDSDSDE 230
>UniRef50_Q5CVD5 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 546
Score = 33.9 bits (74), Expect = 3.8
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +2
Query: 44 GLNESLSDWIKKHVDETPLC-ILTPIFRDYEAYL--KEIQEEYHGPDGDCSEIETKKNVN 214
G+ E + W K V +T + L +++ E L K I+E+ D S + KN+N
Sbjct: 276 GVAEEIESWTKCPVVQTEINKYLESSWKNIEKQLSNKPIEEQN---DKKLSRSSSNKNIN 332
Query: 215 ---SETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPL 343
S TK P E +KN +S+ +S S +P S T L
Sbjct: 333 EAESSTKTPSESNKNSKSEPTSKSSNISKSKSVPSAKEEPKSETKL 378
>UniRef50_A0DBQ3 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 626
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/81 (25%), Positives = 44/81 (54%)
Frame = -1
Query: 468 VDEVPKENPVLIAGMLFIVLVAVFIPKENPFGLSPSILQELLNGVVENGLDGSNLNIDDP 289
+ ++ +N V + + + +AVFI K+N + ++Q+L+N + +N SNLN+ +
Sbjct: 333 ITQMLADNKVNFSSLHRLHFLAVFIEKDNSI-YNEKLIQQLINSISQNQSYNSNLNLLNS 391
Query: 288 DTVRSLLDSEKIPFFDFSTGF 226
T+ LL + + F+ + F
Sbjct: 392 LTL--LLQDQTLAKFNLNNKF 410
>UniRef50_Q04HD0 Cluster: Permease of the major facilitator
superfamily; n=2; Oenococcus oeni|Rep: Permease of the
major facilitator superfamily - Oenococcus oeni (strain
BAA-331 / PSU-1)
Length = 395
Score = 33.5 bits (73), Expect = 5.0
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -1
Query: 483 ILLEFVDEVPKENPVLIAGMLFIVLVAVFIPKENPFGLSPSILQELLNGVVENGLDGSN- 307
IL F D + ++ PVL AGML +L + P F L+ ++ +L GV + LD S
Sbjct: 53 ILGSFSDRIGRK-PVLYAGMLSYLLFFIMTPFIKDFHLAYLLI--ILAGVANSALDASTY 109
Query: 306 ---LNIDDPDTVRSLL 268
L ID T S+L
Sbjct: 110 PIFLEIDKKSTAPSIL 125
>UniRef50_A4M8J2 Cluster: Putative uncharacterized protein
precursor; n=1; Petrotoga mobilis SJ95|Rep: Putative
uncharacterized protein precursor - Petrotoga mobilis
SJ95
Length = 457
Score = 33.5 bits (73), Expect = 5.0
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = -1
Query: 528 DGLDFNPKEKVFDVCILLEFVDEVPKENPVLIAGMLFIVLVAVFIPKENPFGLSPSILQE 349
+ L NP LE++ E P + + G L +++F N + I ++
Sbjct: 26 ENLSKNPATLELSWEYFLEYIIENPSDARITDTGSLISAKISLFNKYRNYNFANFIISED 85
Query: 348 LLNGVVENGLDGSNLNIDDPDTVRSL-LDSEKIPFFD--FSTGFF 223
L N + G+ G+N +I + DT + L + E +P + F+TG F
Sbjct: 86 LKNFCINLGVIGTNFSIPEDDTNKILFIFPEIVPILNNIFNTGNF 130
>UniRef50_A7AML9 Cluster: Variant erythrocyte surface antigen-1,
alpha subunit; n=3; Babesia bovis|Rep: Variant
erythrocyte surface antigen-1, alpha subunit - Babesia
bovis
Length = 1237
Score = 33.5 bits (73), Expect = 5.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 140 LKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFS 262
L+ +Q EYHG GD E T N T + V++ NG+FS
Sbjct: 16 LQSVQLEYHGYQGDTKETGTN---NGATSDKVKEHLNGLFS 53
>UniRef50_Q5R1T0 Cluster: Chromatin assembly factor-1p150; n=6;
Amniota|Rep: Chromatin assembly factor-1p150 - Gallus
gallus (Chicken)
Length = 937
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 554 GAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKR 679
G S S NT+ + ED VP K I ENSV++KR
Sbjct: 753 GDTSPVSPNTSRPQTPVGEDSGVPSKARLKRIISENSVYEKR 794
>UniRef50_Q1A4I6 Cluster: Putative uncharacterized protein; n=1;
Choristoneura occidentalis granulovirus|Rep: Putative
uncharacterized protein - Choristoneura occidentalis
granulovirus
Length = 295
Score = 33.1 bits (72), Expect = 6.6
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 215 SETKNP-VEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNML---GDKPKG 382
S +KN VE++K ESS T++ S + LDP+ S TP SSS ++ P
Sbjct: 32 SSSKNSDVEENKMTDNRESSSKFTLNQSGVPVLDPTPSSSPTPSSSSDSVKVFEAFAPNL 91
Query: 383 FSFGINTATSTINS 424
S + T STIN+
Sbjct: 92 HSMNLATIQSTINT 105
>UniRef50_Q3Y5Y5 Cluster: Int; n=3; Leptospira interrogans|Rep: Int
- Leptospira interrogans
Length = 1224
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +2
Query: 167 GPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLS 346
GPD + N T P + F E+ TV GS D + P ST PL+
Sbjct: 474 GPDQIAPSVAFVTPANGSTGLPTNAGGSIAFDEAMNCGTVLGSISMDDDVTTPLSTVPLN 533
Query: 347 SSCN 358
+CN
Sbjct: 534 INCN 537
>UniRef50_A5E5M4 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1182
Score = 33.1 bits (72), Expect = 6.6
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +2
Query: 200 KKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPK 379
K VN + KS N +++ + S S F +P T +S + N GDK
Sbjct: 454 KFEVNEAPFKEILKSSNSDLPDNTMSVASSTKSAFNANPK----TMEVSDAGNF-GDKAS 508
Query: 380 GFSFGINTATST 415
FSFG NT T+T
Sbjct: 509 LFSFGNNTNTNT 520
>UniRef50_UPI000150A711 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 899
Score = 32.7 bits (71), Expect = 8.7
Identities = 30/120 (25%), Positives = 47/120 (39%)
Frame = +2
Query: 77 KHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGI 256
K D P ++ + + + + ++EY PD + + +S + S+NG
Sbjct: 55 KATDSPPKIKISQVSQQIRSQQQVQKKEYDSPDKEQKQQRVLNKQSSLNLSQCNLSQNG- 113
Query: 257 FSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINSIPAI 436
SS+ SS+ P S +G PK F G + STINSIP I
Sbjct: 114 -QVSSKKKIEGNSSMVHFHPMTN------QKSPQAIGQTPKFFQNGKSMQISTINSIPNI 166
>UniRef50_UPI0000499F64 Cluster: hypothetical protein 5.t00035; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 5.t00035 - Entamoeba histolytica HM-1:IMSS
Length = 476
Score = 32.7 bits (71), Expect = 8.7
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +2
Query: 200 KKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPK 379
K N +T N + G+F S+ + L S S P SSS N +KP
Sbjct: 145 KPNDLKQTSNGFNFNLTGLFGSSTPSTLLQKQDTTPLTNSSSGSLQPSSSSTNSKDNKPM 204
Query: 380 GFSFGINTATSTINS 424
G + +N + + + S
Sbjct: 205 GLTLSLNLSPNELPS 219
>UniRef50_Q6PHJ5 Cluster: Zgc:65960; n=5; cellular organisms|Rep:
Zgc:65960 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 452
Score = 32.7 bits (71), Expect = 8.7
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 53 ESLSDWIKKHVDETPLCILTPIFR-DYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETKN 229
+++ +WI+KH DE I DYE Y K ++ PD D + E +
Sbjct: 194 KTVQEWIEKHQDEIDRVIFCVFLETDYEIY-KRKMSDFFSPDNDDRKKEDDGKMEQGETQ 252
Query: 230 PVE 238
P+E
Sbjct: 253 PME 255
>UniRef50_Q2NDZ8 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter litoralis HTCC2594|Rep: Putative
uncharacterized protein - Erythrobacter litoralis
(strain HTCC2594)
Length = 2409
Score = 32.7 bits (71), Expect = 8.7
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = -1
Query: 327 NG-LDGSNLNIDDPDTVRSLLDSEKIPFFDF--STGFFVSELTFF-FVSISEQ---SPSG 169
NG L GSN ++ S LD FFDF T F + F + +S SPSG
Sbjct: 124 NGILFGSNTSVSANSFYASTLDVADQDFFDFYEGTNLFANGTNVFELIGVSSAGIISPSG 183
Query: 168 P*YSSCISFKYAS*SLNIGVKMHKGVSSTCFLIQSD 61
+++ + +AS SLN+ + G S T SD
Sbjct: 184 ASFTTNGNLLFASHSLNLTATFNSG-SGTAVFAASD 218
>UniRef50_Q9FLC1 Cluster: Genomic DNA, chromosome 5, TAC
clone:K18I23; n=4; Arabidopsis thaliana|Rep: Genomic
DNA, chromosome 5, TAC clone:K18I23 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 221
Score = 32.7 bits (71), Expect = 8.7
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 137 YLKEIQEEYHGPDGDCSEI--ETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKL 310
+L+E +E Y+G D S I KN+++E + P + S SR L +I+K
Sbjct: 115 FLEEFRENYNGDLVDASRICFNVWKNMSAEDQKPFNARAMEVDSAHSRKLNEEAKTIYKA 174
Query: 311 D 313
D
Sbjct: 175 D 175
>UniRef50_Q6YY15 Cluster: Putative uncharacterized protein
OSJNBb0056I22.34; n=3; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0056I22.34 - Oryza sativa
subsp. japonica (Rice)
Length = 669
Score = 32.7 bits (71), Expect = 8.7
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 86 DETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKN------VNSETKNPVEKSK 247
D T + +L+P+ R Y A +E +EY GD S + KN NS + +P S
Sbjct: 362 DATGVKMLSPLPRKYVALAEEEDDEYVDICGDASPVVLHKNHGEIIISNSSSSSPSSDSD 421
Query: 248 NGIFSESSRDLTVSGSS 298
+ S SS + S SS
Sbjct: 422 SDSNSSSSSSSSSSSSS 438
>UniRef50_Q8T3T3 Cluster: Thrombospondin-related protein-1; n=1;
Toxoplasma gondii|Rep: Thrombospondin-related protein-1 -
Toxoplasma gondii
Length = 969
Score = 32.7 bits (71), Expect = 8.7
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 ILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETK-NPVEKSKNGIFSESSRDL 280
+L + ++ +A+ +E EE GPD D +E E NSE NP K +NG SE
Sbjct: 896 LLHEVSQEPQAHEEEKAEEGEGPDED-AEPEAAVEGNSEFDCNPRAKEENGEESEQDASD 954
Query: 281 TVSGS 295
+ SGS
Sbjct: 955 SESGS 959
>UniRef50_Q7PWG9 Cluster: ENSANGP00000006494; n=2; cellular
organisms|Rep: ENSANGP00000006494 - Anopheles gambiae
str. PEST
Length = 1721
Score = 32.7 bits (71), Expect = 8.7
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +2
Query: 503 SFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVE 637
SFGL S S+ PL G P T+T A+ +E+VPP VE
Sbjct: 1111 SFGLAGSSSASEGPLSLGKPKATAT-------ASTANENVPPPVE 1148
>UniRef50_Q5KJA8 Cluster: Retrograde transport, endosome to
Golgi-related protein, putative; n=2; Filobasidiella
neoformans|Rep: Retrograde transport, endosome to
Golgi-related protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1326
Score = 32.7 bits (71), Expect = 8.7
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 152 QEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFS 331
Q + D + +E E +K+VNS +N E ++ + + VSG + + P P
Sbjct: 1112 QRQKDKEDLEKTESEQEKDVNSVKENGAELTEKNEPIDGEQVQPVSGPAEDQQAPEMPVK 1171
Query: 332 TTPLSS-SCNMLGD 370
+P SS SC++ GD
Sbjct: 1172 ASPPSSPSCSLKGD 1185
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,361,673
Number of Sequences: 1657284
Number of extensions: 10940114
Number of successful extensions: 42958
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 40091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42822
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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