Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30236
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-16|CAB60516.1| 497|Caenorhabditis elegans Hypothetical... 33 0.25
AL132860-15|CAB60499.1| 512|Caenorhabditis elegans Hypothetical... 32 0.34
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 31 0.78
U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical pr... 31 1.0
U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical pr... 31 1.0
U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical pr... 31 1.0
U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical pr... 31 1.0
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 31 1.0
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 31 1.0
AL032631-14|CAA21578.1| 243|Caenorhabditis elegans Hypothetical... 30 1.8
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 29 3.1
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 29 3.1
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 29 3.1
AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical... 29 4.1
AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81147-7|CAB03536.1| 459|Caenorhabditis elegans Hypothetical pr... 28 5.5
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 28 5.5
Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adap... 28 7.2
AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adap... 28 7.2
AF016686-10|AAB66243.1| 172|Caenorhabditis elegans Hypothetical... 28 7.2
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 28 7.2
AC006685-5|AAK84575.1| 254|Caenorhabditis elegans Hypothetical ... 28 7.2
AC006677-9|AAF39947.1| 344|Caenorhabditis elegans Serpentine re... 28 7.2
Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical p... 27 9.6
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 27 9.6
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 9.6
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 9.6
AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical... 27 9.6
AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical ... 27 9.6
>AL132860-16|CAB60516.1| 497|Caenorhabditis elegans Hypothetical
protein Y56A3A.17b protein.
Length = 497
Score = 32.7 bits (71), Expect = 0.25
Identities = 54/191 (28%), Positives = 71/191 (37%), Gaps = 17/191 (8%)
Frame = +2
Query: 167 GPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSG----------SSIFKLDP 316
G DGD + K + S K P E S+ ++S+ LT SS+F P
Sbjct: 230 GKDGDKPKETPKFSGFSFGKKPAEPSEEPKAADSTPKLTFGSPKEADLPKPASSLFGASP 289
Query: 317 SKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINSIPAIXXXXXXXXXXXXXXXXXXXX 496
SKP SS + PK FS ++TA S S A
Sbjct: 290 SKPLVFG--GSSADSTTSAPKPFS-ALSTAASLFGSSSA-------------STTTTATQ 333
Query: 497 XFSFGLKSSPSSDGSPLKFGAPSLTST---NTNNTEPANQEDED----VPPKVEFTPIAE 655
SFG S S+ GS L G L N N +P ++D VPPKVE E
Sbjct: 334 PLSFG---SSSTGGSSLFSGFAGLAQKAMENQNQAKPEGSGEDDEGEYVPPKVETVENQE 390
Query: 656 ENSVFDKRCKV 688
++V + V
Sbjct: 391 PDAVLSSKVSV 401
>AL132860-15|CAB60499.1| 512|Caenorhabditis elegans Hypothetical
protein Y56A3A.17a protein.
Length = 512
Score = 32.3 bits (70), Expect = 0.34
Identities = 44/150 (29%), Positives = 55/150 (36%), Gaps = 7/150 (4%)
Frame = +2
Query: 260 SESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINSIPAIX 439
S DL SS+F PSKP SS + PK FS ++TA S S A
Sbjct: 286 SPKEADLPKPASSLFGASPSKPLVFG--GSSADSTTSAPKPFS-ALSTAASLFGSSSA-- 340
Query: 440 XXXXXXXXXXXXXXXXXXXXFSFGLKSSPSSDGSPLKFGAPSLTST---NTNNTEPANQE 610
SFG S S+ GS L G L N N +P
Sbjct: 341 -----------STTTTATQPLSFG---SSSTGGSSLFSGFAGLAQKAMENQNQAKPEGSG 386
Query: 611 DED----VPPKVEFTPIAEENSVFDKRCKV 688
++D VPPKVE E ++V + V
Sbjct: 387 EDDEGEYVPPKVETVENQEPDAVLSSKVSV 416
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
protein F36H2.3 protein.
Length = 1388
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 335 TPLSSSCNMLGDKPKG-FSFGINTATST-INSIP 430
TP SSSC + P G + N ATST INS+P
Sbjct: 271 TPTSSSCRVPSSTPNGNIVYSANVATSTSINSVP 304
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 339 GVVENGLDGSNLNIDDPDTVRSLLDSEKIPFFDFSTGFFVSE 214
GVV G+ G+N +I P+ + L+D K+ F F G+ + E
Sbjct: 11 GVVSAGIPGTNGDIRQPNFQKELMDEAKVYLFKF--GYMIPE 50
>U49956-8|AAA93436.1| 765|Caenorhabditis elegans Hypothetical
protein M03A1.6a protein.
Length = 765
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 500 FSFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
FSFG S+P S G S+ +T+T N E A + E++P
Sbjct: 658 FSFGTSSNPKKTQSTASLG--SVNATSTENIEFAKEAAEELP 697
>U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical
protein M03A1.6b protein.
Length = 753
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 500 FSFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
FSFG S+P S G S+ +T+T N E A + E++P
Sbjct: 646 FSFGTSSNPKKTQSTASLG--SVNATSTENIEFAKEAAEELP 685
>U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6d protein.
Length = 762
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 500 FSFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
FSFG S+P S G S+ +T+T N E A + E++P
Sbjct: 655 FSFGTSSNPKKTQSTASLG--SVNATSTENIEFAKEAAEELP 694
>U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6c protein.
Length = 762
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 500 FSFGLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
FSFG S+P S G S+ +T+T N E A + E++P
Sbjct: 655 FSFGTSSNPKKTQSTASLG--SVNATSTENIEFAKEAAEELP 694
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 518 SSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVE 637
SS SS+ P + AP++ + ++ + EPA QE ED +VE
Sbjct: 27 SSSSSNSIPTQ-SAPAMNAASSPSKEPAKQEKEDDKKEVE 65
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 30.7 bits (66), Expect = 1.0
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +2
Query: 119 FRDYEAYLKEIQEEYHGPDGDCSEIET-KKNVNSET-KNPVEKSKNGIFSESSRDLTVSG 292
FR YE Y+K+ Q D E+E + +NS + + +GI + SSR+ S
Sbjct: 10 FRQYETYMKQKQSADWQLDELLEELEALETQLNSSNGGDQLLLGVSGIPASSSRENVKSI 69
Query: 293 SSIFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINS 424
S++ P+ + TP + G+ GI+ TS INS
Sbjct: 70 STLPPPPPALSYHQTPQQPQLLHHHNNHLGYQNGIHQITS-INS 112
>AL032631-14|CAA21578.1| 243|Caenorhabditis elegans Hypothetical
protein Y106G6H.15 protein.
Length = 243
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -1
Query: 540 EPSEDGLDFNPKEKVFDVCILLEFVDEVPKENPVLIAGMLFIVLVAVFIPKENPFGLSPS 361
EP+E GL PKE D+ I+ + DE K P G L + ++ + K + F + S
Sbjct: 105 EPNEQGLSSKPKEN--DIRIVPQITDEEFKTIPKYQLGRLTLEMMNEIVSKMDDFLMKKS 162
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 509 GLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
G +P G P G P + T N T P NQ E P
Sbjct: 113 GSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPP 151
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 509 GLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
G +P G P G P + T N T P NQ E P
Sbjct: 150 GSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPP 188
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 509 GLKSSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVP 625
G +P G P G P + T N T P NQ E P
Sbjct: 134 GSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPP 172
>AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical
protein Y51H4A.25a protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETK--KNVNSETKNPVEKSKNGIFSESSRDLTVS 289
+F DYE K++Q +H + C I+TK K + K + +N I S S
Sbjct: 176 VFEDYEFIEKQVQMSWHPDNVFCFVIDTKSSKEFKTNMKKLADCFENIIVLPSKHSFDSS 235
Query: 290 G 292
G
Sbjct: 236 G 236
>AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical
protein Y51H4A.25a protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETK--KNVNSETKNPVEKSKNGIFSESSRDLTVS 289
+F DYE K++Q +H + C I+TK K + K + +N I S S
Sbjct: 176 VFEDYEFIEKQVQMSWHPDNVFCFVIDTKSSKEFKTNMKKLADCFENIIVLPSKHSFDSS 235
Query: 290 G 292
G
Sbjct: 236 G 236
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 143 KEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRD 277
KE EE D + +E KKN S K P + + ESS D
Sbjct: 328 KESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGD 372
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 518 SSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENS 664
SS SSD S + S S+++++ ++ E E PPK + +EE+S
Sbjct: 700 SSSSSDSSDSSDSSDSDDSSDSSSDSSSSSESEPEPPKKKKKKNSEESS 748
>Z81147-7|CAB03536.1| 459|Caenorhabditis elegans Hypothetical
protein T09E11.9 protein.
Length = 459
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETK 202
+++DYE K++Q YH + C I+ K
Sbjct: 152 VYKDYELVEKQVQMSYHPQNSFCFAIDKK 180
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 518 SSPSSDGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENS 664
SS SSD S + S S+++++ ++ E E PPK + +EE+S
Sbjct: 700 SSSSSDSSDSSDSSDSDDSSDSSSDSSSSSESEPEPPKKKKKKNSEESS 748
>Z92838-9|CAD30449.1| 549|Caenorhabditis elegans Hypothetical
protein T03D8.1c protein.
Length = 549
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
E+P GL +P ++ + + NGLDG NLN
Sbjct: 342 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 372
>Z92838-8|CAB07407.1| 401|Caenorhabditis elegans Hypothetical
protein T03D8.1b protein.
Length = 401
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
E+P GL +P ++ + + NGLDG NLN
Sbjct: 194 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 224
>Z92838-7|CAB07405.1| 593|Caenorhabditis elegans Hypothetical
protein T03D8.1a protein.
Length = 593
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
E+P GL +P ++ + + NGLDG NLN
Sbjct: 386 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 416
>Z70287-7|CAA94303.2| 198|Caenorhabditis elegans Hypothetical
protein R09E10.2 protein.
Length = 198
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 230 PVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTP 340
P+EK K G +S +L V + ++L PSK P
Sbjct: 107 PLEKKKKGKYSSEYANLLVEKPTRYRLVPSKNVKVVP 143
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 533 DGSPLKFGAPSLTSTNTNNTEPANQEDEDVPPKVEFTPIAEENSVFDKRCK 685
DG P++ G T+ N + TE D D PK+ + P E + C+
Sbjct: 14 DGIPMENGKKKDTTVNVS-TEDVGSIDSDEEPKIVYEPSKMEKLINYMLCR 63
>AF286206-1|AAK28741.1| 549|Caenorhabditis elegans C kinase adapter
1s protein.
Length = 549
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
E+P GL +P ++ + + NGLDG NLN
Sbjct: 342 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 372
>AF286205-1|AAK28740.1| 593|Caenorhabditis elegans C kinase adapter
1 protein.
Length = 593
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
E+P GL +P ++ + + NGLDG NLN
Sbjct: 386 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 416
>AF016686-10|AAB66243.1| 172|Caenorhabditis elegans Hypothetical
protein R07C3.14 protein.
Length = 172
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 200 LSQFQSNHHLVHDTLPVFLLNMLHSL*I*VLRCIKVFHPHVF*SNLIEIHSSLSI*HNIL 21
+ FQ+ +LV DTL ++ N+ +L +FHP F + I +L I H I+
Sbjct: 26 IDAFQNARNLVTDTLEIYTGNLRETL----ESLPSIFHPSTFPLKALRILRNLHIKHPII 81
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -1
Query: 561 GAPNLRGEPSEDGL---DFNPKEKVFDVCIL 478
G P L GEP DGL D+N E + + CIL
Sbjct: 108 GKPGLDGEPGFDGLPGRDYNYMELMTEHCIL 138
>AC006685-5|AAK84575.1| 254|Caenorhabditis elegans Hypothetical
protein T13G4.6 protein.
Length = 254
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 182 CS-EIETKKN-VNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSS 349
CS +I T+++ V S ++P+E+ + I + +D+ + F L P F+TT SS
Sbjct: 152 CSWQIITRRSMVPSTQRHPMERLRTRIIRRNPQDINLEAILKFSLCPPILFTTTIFSS 209
>AC006677-9|AAF39947.1| 344|Caenorhabditis elegans Serpentine
receptor, class h protein56 protein.
Length = 344
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 294 DPDTVRSLLDSEKIPFFDFSTGF-FVSELTFFFV 196
DP T L E +PF+ + GF FV TFFF+
Sbjct: 190 DPKTYVLLQGGEVLPFWSITIGFGFVIFQTFFFL 223
>Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical
protein T28F3.9 protein.
Length = 513
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETKKN 208
+F DYE K++Q +H + C I+TK +
Sbjct: 176 VFEDYEFIEKQVQMSWHPDNVFCFVIDTKSS 206
>Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical
protein T28F3.9 protein.
Length = 513
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETKKN 208
+F DYE K++Q +H + C I+TK +
Sbjct: 176 VFEDYEFIEKQVQMSWHPDNVFCFVIDTKSS 206
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 357 LQELLNGVVENGLDGSNLNIDDPDT 283
LQ+ +NGV +G+ SNL ++P+T
Sbjct: 375 LQKAINGVSASGVSSSNLLTNEPNT 399
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 357 LQELLNGVVENGLDGSNLNIDDPDT 283
LQ+ +NGV +G+ SNL ++P+T
Sbjct: 402 LQKAINGVSASGVSSSNLLTNEPNT 426
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 357 LQELLNGVVENGLDGSNLNIDDPDT 283
LQ+ +NGV +G+ SNL ++P+T
Sbjct: 402 LQKAINGVSASGVSSSNLLTNEPNT 426
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1563 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1598
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1585 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1620
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1376 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1411
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1683 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1718
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1563 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1598
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1585 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1620
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1376 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1411
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1683 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1718
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1394 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1429
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 512 LKSSPSSDGSP-LKFGAPSLTSTNTNNTEPANQEDE 616
+ SS SS P + F PS+++T T + E ++E+E
Sbjct: 1354 ISSSGSSTSKPAMNFPPPSISTTTTTSMESESKEEE 1389
>AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical
protein R07C3.3 protein.
Length = 470
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETK 226
+F DYE K++Q YH + C I+ + + K
Sbjct: 137 VFADYEFIEKQVQASYHPQNVFCFAIDANSSAEFQRK 173
>AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical
protein C50H11.13 protein.
Length = 350
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = -2
Query: 272 CSIQKKFHFL-----IFQQDFLFLN*HSFLSQFQSNHHLVHDTLPVFLL 141
C ++ HFL I +F+ L+ FLS N LV+DT+P FL+
Sbjct: 57 CRSKRNAHFLPYLCSILAANFVLLS-TIFLSVLAKNTDLVYDTIPGFLV 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,718,542
Number of Sequences: 27780
Number of extensions: 282902
Number of successful extensions: 1550
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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