Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30233
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532... 32 0.43
11_01_0606 + 4831102-4833033 31 0.57
07_01_0113 + 840866-841574,841687-842210,842391-842840,843541-84... 31 0.99
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 30 1.7
01_06_1377 + 36764461-36765339 29 2.3
04_04_1194 - 31643422-31643511,31643695-31643805,31643892-316444... 29 3.0
11_03_0128 - 10437407-10438049,10438097-10438272 29 4.0
08_01_1026 - 10366534-10368021,10368505-10368525 28 5.3
06_03_1142 + 27961999-27962263,27963735-27965080,27965158-279654... 28 5.3
03_06_0340 + 33252677-33252864,33253086-33254442,33254565-332546... 28 5.3
02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037... 28 5.3
01_05_0245 + 19872219-19872231,19872298-19872395,19872449-198725... 28 5.3
12_02_1014 - 25316682-25317236 28 7.0
12_01_0774 + 7063465-7064011,7065183-7065791,7067905-7068464,706... 28 7.0
10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569 28 7.0
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824... 28 7.0
04_03_0811 - 19909128-19912214 28 7.0
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 28 7.0
03_02_0816 + 11487811-11488708,11488835-11489235 27 9.2
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 27 9.2
01_01_0357 - 2816650-2817897 27 9.2
>11_01_0657 +
5322295-5323367,5323436-5323555,5323743-5323791,
5323968-5324084,5324200-5324268,5324394-5324488,
5325183-5325521,5327043-5327084,5327814-5327907,
5328121-5328190,5328719-5329677
Length = 1008
Score = 31.9 bits (69), Expect = 0.43
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 71 IGAAKSRHLAQLSRHLNTIVQQETQLSLVRPA*WVR-D*PE*IPILFLEVSFTEQHQADL 247
+G AQ+ RH + + + QL +R V+ + P P FL+ +QH L
Sbjct: 201 MGQPDQNSSAQMMRHASNVKIEPQQLQALRSLSAVKMEQPTSDPSAFLQQQQQQQHLLQL 260
Query: 248 EAQHPDLSGALAVVHVQQPVHGEVQAQRHVHGAWILR 358
Q+P + A + +QQ ++Q Q+ IL+
Sbjct: 261 TKQNPQAAAAAQLNLLQQQRILQMQQQQQQQQQQILK 297
>11_01_0606 + 4831102-4833033
Length = 643
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 409 DIPDMITVLTTL-YEVIAAENPSAVNVPLCLDLSMNWLLNVYDSQRTGQIRVLSFKVGLV 233
+IP + +L+ L Y + N S V P L L++ ++Q TG I + K+G +
Sbjct: 459 EIPSTLVLLSKLCYLDLHGNNFSGVIPPSISSLQFLSTLDLGNNQLTGTIPTMPTKIGAL 518
Query: 232 LLCKGHLE 209
+L HL+
Sbjct: 519 ILSHNHLQ 526
>07_01_0113 +
840866-841574,841687-842210,842391-842840,843541-843699
Length = 613
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 505 VQKALCMHMLQLPAALEAFDSHGLRAQNDRLI-DIPDMITVLTTLYEVIAAENPSAVNVP 329
+ +L H+ LP LEA + L ++R+ +IP I L L ++ + N +P
Sbjct: 228 ISGSLPAHLGTLPPHLEAPELQTLLMYSNRIGGNIPQSICELQLLGDIDLSGNLLVGEIP 287
Query: 328 LCLDLSMNWLL 296
C ++S N+LL
Sbjct: 288 QCSEISYNFLL 298
>03_02_0981 +
12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 88 PPPRPAVSAPEYNRAARDPAFFGPPCMMGP 177
PP R AV+ P Y R A +P + P + P
Sbjct: 72 PPARMAVARPIYGRVAGEPVYVAEPALPPP 101
>01_06_1377 + 36764461-36765339
Length = 292
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 34 RPA-RSNSGLRVRYWSRQKPPPRPAVSAPEYNRAARDPAFFGPP 162
RP+ R LR+R R++ PP P P+Y + P +F PP
Sbjct: 135 RPSGRPQGKLRIRLALRERSPPPP---EPQYPPPSSSPYYFPPP 175
>04_04_1194 -
31643422-31643511,31643695-31643805,31643892-31644406,
31644456-31644756
Length = 338
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 34 RPARSNSGLRVRY-WSRQKPPPRPAVSAPEYNRAARDPA 147
R RS+ RY W PPP P + R+ RDPA
Sbjct: 33 RQCRSSRVKPKRYPWVASPPPPPPELKPARRKRSGRDPA 71
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -1
Query: 249 SRSAWC----CSVKDTSRKSIGIYSG*SRTHHAGRTKESWVSCCTIVFRC 112
S S+WC C S +S+G + R+H + T SW + RC
Sbjct: 222 SASSWCPSSRCPSPTASSESLGSWGSGCRSHLSSPTCSSWWRTTALACRC 271
>08_01_1026 - 10366534-10368021,10368505-10368525
Length = 502
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +1
Query: 88 PPPRPAVSAPEYNRAARDPAFFGPPCMMGPRLTGINTYTFPRGVLYRAXXXXXXXXXXXX 267
PPP PA PE + D A PP G G +L A
Sbjct: 88 PPPPPAEPEPEPEQDEEDAASMIPPASDGGGGGGGGFSPTKLSMLTSAGVVYEVMQMDGY 147
Query: 268 VRCAGCRTRSA 300
+ C GC R+A
Sbjct: 148 LLCEGCNVRTA 158
>06_03_1142 +
27961999-27962263,27963735-27965080,27965158-27965435,
27965706-27965737,27965830-27966236,27966373-27966858
Length = 937
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 307 NWLLNVYDSQRTGQIRVLSFKVGLVLL 227
+WL V DS +G ++ +S+ GL++L
Sbjct: 257 DWLAAVMDSSMSGDLKTMSYMQGLIVL 283
>03_06_0340 +
33252677-33252864,33253086-33254442,33254565-33254667,
33256081-33256171,33257208-33257300,33258316-33258471,
33258583-33258655
Length = 686
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 22 WQQWRPARSNSGLRVRYWSRQKPPPRPAVS 111
W W P+ SN+ LR R W PP V+
Sbjct: 509 WSNW-PSPSNANLRTREWQHGGNPPSCGVA 537
>02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,
1003716-1003805,1004034-1004111,1004513-1004518,
1004849-1004958,1005174-1005369
Length = 1058
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +3
Query: 12 LPSLAAVEACSKQLRTEGSILEPPKAATSPSCLGT*IQSCSKRPSFLWSALHDGSAINRN 191
LP+ +EA + +E + P + P T I+ K + S +HD +A+N
Sbjct: 976 LPTKDTIEAA--RAASEKLLKRPGAGSEGPLSSCTMIKKLEKVKTAKRSVVHD-AALNHL 1032
Query: 192 KYLYFSSRCPLQSN 233
+Y+ S+R PL+ N
Sbjct: 1033 EYIRGSTRYPLERN 1046
>01_05_0245 +
19872219-19872231,19872298-19872395,19872449-19872592,
19873322-19873351,19873463-19873525,19873608-19873663,
19874040-19874096,19874338-19874372,19874698-19874787,
19874855-19874901,19875341-19875421
Length = 237
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 33 EACSKQLRTEGSILEPPKAATSPSCLGT*IQSCSKRPSFLWSALHDGS-AINRNKYLYFS 209
E ++ +RT S L+PP+ SC S ++ +F W A H + + N Y
Sbjct: 102 EKAARWIRTMESALKPPRKDELVSC------SHTRWQAFRWDAAHARAFKLQENNDAYML 155
Query: 210 SRC 218
SRC
Sbjct: 156 SRC 158
>12_02_1014 - 25316682-25317236
Length = 184
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 1 FLLYCPPWQQWRPARSNSGLRVRYWSRQKPPPRPAVSAP 117
F L CPP W PA + V + +P PRPAV+ P
Sbjct: 104 FGLDCPPMPAWSPAPPVAPPVVVH----RPTPRPAVAMP 138
>12_01_0774 +
7063465-7064011,7065183-7065791,7067905-7068464,
7069411-7069530
Length = 611
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 572 ELLSRPQRGAVLGLQDRPQATDGAESS 492
E+L P GA G ++ QATDGA S
Sbjct: 106 EMLQLPNNGAPHGEEEEGQATDGASHS 132
>10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569
Length = 474
Score = 27.9 bits (59), Expect = 7.0
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = -2
Query: 308 ELAAERVRQPAHRTDQGVELQGRLGVAL*RTPRGKV*VFIPVNRGPIMQG-----GPKK- 147
E AA R R+P G GRLG L R PRG + +P +RG +G P+
Sbjct: 96 ERAARRARRPGQDGGAGGLAGGRLG-GLPR-PRGGRLLLVPRSRGTAARGRDAEVSPRSS 153
Query: 146 -AGSLAARL--YSGAE-TAGRGGGFWRLQYRTLSPELLRAGL 33
A + AA L + G E RGGG + + L E + AG+
Sbjct: 154 VAAASAAGLVRWPGREDERRRGGGEGKKEKPPLPVESVLAGV 195
>07_03_0906 +
22481456-22481802,22482105-22482186,22482299-22482400,
22483005-22483315,22483948-22484044,22484522-22484696,
22485074-22485150,22485632-22486027,22486254-22486303,
22487315-22487382,22488142-22488701
Length = 754
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 82 QKPPPRPAVSAPEYNRAARDPAFFGPP 162
Q PP RP V+AP + AA P PP
Sbjct: 6 QPPPTRPPVAAPPPSLAAAAPISVQPP 32
>04_03_0811 - 19909128-19912214
Length = 1028
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 532 YRTALKLRTVQKALCMHMLQLPAALEAFDS-HGLRAQNDRLIDIPD-MITVLTTLYEVIA 359
++ +KL + ++C ++ +LP ++ A S L +L +PD M + L +
Sbjct: 426 FQDMIKLEELLLSMCSNLEELPRSISALSSLLTLEISGTKLTSLPDWMFIEMQQLQLLKL 485
Query: 358 AENPSAVNVP 329
EN V+VP
Sbjct: 486 IENKLLVSVP 495
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -1
Query: 264 SGC*ASRSAWCCSVKDTSRKSIGI-YSG*SRTHHAGRTKESWVSCCTIVFRCRDSWA 97
+GC WC S + S KS+GI YS +R H G K ++ D W+
Sbjct: 63 NGC-MRNGLWCASWGNCS-KSVGIIYSNPTRKEHGGHKKSPHAFLRKMMESTMDDWS 117
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 16 PPWQQWRPARSNSGLRVRYWSRQKPPPRPAVSAPEYNRAARDPAFFGPPCMMGPRLTGI 192
PP QQ PA + R R PR APE+ RA+ D PP ++ RL G+
Sbjct: 84 PPQQQMHPAPTPVRRR-----RSCDAPRSPTIAPEHRRASCDSPRPTPPAIVA-RLMGL 136
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 16 PPWQQWRPARSNSGLRVRYWSRQKPPPRPAVSAPEYNRAARDPAFFGP 159
PP ++ P R L R S P P AV+AP Y RD A P
Sbjct: 17 PPPRRCAPRRHRRALAPRAAS-SSPSPSTAVAAPVYAPTPRDRALRTP 63
>01_01_0357 - 2816650-2817897
Length = 415
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 85 KPPPRPAVSAPEYNRAARDPAFFGP 159
+PPPRP P + RA R PA GP
Sbjct: 113 QPPPRPL--QPYHQRAPRSPASEGP 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,152,590
Number of Sequences: 37544
Number of extensions: 414854
Number of successful extensions: 1943
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1939
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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