Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30228
         (732 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075463-1|AAL68276.1|  245|Drosophila melanogaster RE18374p pro...    50   3e-06
AE014297-4727|AAF57135.2|  436|Drosophila melanogaster CG31005-P...    50   3e-06
AE014296-1386|AAF50475.2|  491|Drosophila melanogaster CG7476-PA...    29   8.6  
AE014296-1385|AAO41271.1|  475|Drosophila melanogaster CG7476-PB...    29   8.6  

>AY075463-1|AAL68276.1|  245|Drosophila melanogaster RE18374p
           protein.
          Length = 245

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 1   GDFILAVASMMIARLRSDDVTLVLSQV-SQIINNVLMVRKKNKTACDTAADNTSRKIRK 174
           GD+IL++AS+MIARLRSDDVT+VLSQ+ + ++    M     +T  +  A   ++  RK
Sbjct: 38  GDYILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRK 96


>AE014297-4727|AAF57135.2|  436|Drosophila melanogaster CG31005-PA
           protein.
          Length = 436

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 1   GDFILAVASMMIARLRSDDVTLVLSQV-SQIINNVLMVRKKNKTACDTAADNTSRKIRK 174
           GD+IL++AS+MIARLRSDDVT+VLSQ+ + ++    M     +T  +  A   ++  RK
Sbjct: 229 GDYILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRK 287


>AE014296-1386|AAF50475.2|  491|Drosophila melanogaster CG7476-PA,
           isoform A protein.
          Length = 491

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 201 FLYLSLKRNLT--YFAACVIGRSIARCLIFFTYH*NIINNL 85
           +LY+   RN+T      C++ R I +CLI    H N++N +
Sbjct: 240 YLYIKKLRNVTGKCIVCCIVSRFI-QCLIMILDHLNLLNGI 279


>AE014296-1385|AAO41271.1|  475|Drosophila melanogaster CG7476-PB,
           isoform B protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 201 FLYLSLKRNLT--YFAACVIGRSIARCLIFFTYH*NIINNL 85
           +LY+   RN+T      C++ R I +CLI    H N++N +
Sbjct: 224 YLYIKKLRNVTGKCIVCCIVSRFI-QCLIMILDHLNLLNGI 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,881,115
Number of Sequences: 53049
Number of extensions: 690635
Number of successful extensions: 1529
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)