Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30228
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    22   5.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.8  

>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 345 IQRRSKNYTMQSNL*IYENKRTHHLI 268
           ++RR K   +  N+    NK+T H++
Sbjct: 44  VRRRFKGQYLMPNIGYGSNKKTRHML 69


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 330 KNYTMQSNL*IYENK 286
           +NY M+SN+ +Y++K
Sbjct: 61  RNYDMESNMDMYKDK 75


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 330 KNYTMQSNL*IYENK 286
           +NY M+SN+ +Y++K
Sbjct: 61  RNYDMESNMDMYKDK 75


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 643 SVLPSPIVFPDVRAYGKSSYHP 578
           S   SP V+P    +   SYHP
Sbjct: 297 SACHSPGVYPSTAGFLPPSYHP 318


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 686 IHRKIVNSVLWTV*QCTAIT 627
           +H  + N +LW   +CT I+
Sbjct: 106 VHESLKNVLLWDFQECTFIS 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,966
Number of Sequences: 438
Number of extensions: 4158
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)