Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30225
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    86   3e-19
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   7.5  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   7.5  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   7.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   7.5  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   7.5  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   7.5  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   7.5  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   7.5  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   7.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.9  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 85.8 bits (203), Expect = 3e-19
 Identities = 53/194 (27%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
 Frame = +3

Query: 9   MSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKT 188
           M   W D+V  +TGA +GIG+ ++  L+ +G+K I I    ++  K+L  EL SK G K 
Sbjct: 1   MEQNWIDEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKM-KTLVEELKSKPG-KL 58

Query: 189 KFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNA------ALMNDSIGIYKKAIEVNVTA 350
              + D++++   L ++  V +  G ID++INNA       L ND +  +KK  ++N+  
Sbjct: 59  VPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLG 118

Query: 351 LITSTLKAIEIMGKHSGGKGGTVINVSSVAALT---QSHVMPIYFATKSAVLQFSNCIGR 521
           L     + +++M K  G   G ++N++  + L     +   P Y A+K A+   ++C+  
Sbjct: 119 LTCMIQEVLKLM-KKKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRS 177

Query: 522 PEHFSKTGVRVLTV 563
                ++ ++V+++
Sbjct: 178 ELAQCESNIKVISI 191


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -1

Query: 600 VGSTTRCLLHQSTLSVLGPRFSKSVPVYRYNY 505
           + S   C+   +T+   GP  +K    + Y Y
Sbjct: 230 MSSINPCIFDNATIVNNGPEAAKMAKAFTYTY 261


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 543 RFSKSVPVYRYN 508
           ++ +S+PVY+YN
Sbjct: 447 QYQQSLPVYQYN 458


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 567 FGATDTALLTRRETRHF 617
           FG T   +L ++ T HF
Sbjct: 43  FGTTKDLILVKKSTAHF 59


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 548  PSTDSVLWCNRHRVVDPT 601
            P TDS  W  +   V+PT
Sbjct: 1147 PDTDSENWTPKMMAVEPT 1164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,940
Number of Sequences: 438
Number of extensions: 3957
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)