Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30224
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   7.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 261 CPPRGVNSKFVL 296
           CPP+GV+ K VL
Sbjct: 53  CPPQGVDLKRVL 64


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 379 LKSYPRTNEAQEWNVLFRTIEY 314
           + S   T + ++WN+LF+T+ +
Sbjct: 150 VNSLTLTLKRKKWNLLFKTLTH 171


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 379 LKSYPRTNEAQEWNVLFRTIEY 314
           + S   T + ++WN+LF+T+ +
Sbjct: 76  VNSLTLTLKRKKWNLLFKTLTH 97


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/35 (14%), Positives = 19/35 (54%)
 Frame = -3

Query: 205 LAFENLCFIYLFCNWELSTIE*IYTTKILILFNST 101
           ++F  +C+++   +  +     ++   +L+LF ++
Sbjct: 221 ISFSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNS 255


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/35 (14%), Positives = 19/35 (54%)
 Frame = -3

Query: 205 LAFENLCFIYLFCNWELSTIE*IYTTKILILFNST 101
           ++F  +C+++   +  +     ++   +L+LF ++
Sbjct: 239 ISFSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNS 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,599
Number of Sequences: 336
Number of extensions: 3430
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)