Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30224
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117452-1|AAI17453.1|  797|Homo sapiens interphotoreceptor matr...    31   4.0  
BC117450-1|AAI17451.1|  797|Homo sapiens interphotoreceptor matr...    31   4.0  
AL392166-2|CAI41298.1|  797|Homo sapiens interphotoreceptor matr...    31   4.0  
AL356962-1|CAC36327.2|  797|Homo sapiens interphotoreceptor matr...    31   4.0  
AF047492-1|AAC03789.2|  797|Homo sapiens interphotoreceptor matr...    31   4.0  
AF017776-1|AAC68835.1|  797|Homo sapiens interphotoreceptor matr...    31   4.0  
AK125823-1|BAC86306.1|  154|Homo sapiens protein ( Homo sapiens ...    30   7.1  

>BC117452-1|AAI17453.1|  797|Homo sapiens interphotoreceptor matrix
           proteoglycan 1 protein.
          Length = 797

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -2

Query: 191 FVFYLFIL*LGTFNNRINIHH---KNIDIIQFN-MTPVTRDVYKLSPLKFLLD 45
           FVF++F+   GT +  INI+H   K+ID    N  T  T  +YK+S ++ + D
Sbjct: 10  FVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFD 62


>BC117450-1|AAI17451.1|  797|Homo sapiens interphotoreceptor matrix
           proteoglycan 1 protein.
          Length = 797

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -2

Query: 191 FVFYLFIL*LGTFNNRINIHH---KNIDIIQFN-MTPVTRDVYKLSPLKFLLD 45
           FVF++F+   GT +  INI+H   K+ID    N  T  T  +YK+S ++ + D
Sbjct: 10  FVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFD 62


>AL392166-2|CAI41298.1|  797|Homo sapiens interphotoreceptor matrix
           proteoglycan 1 protein.
          Length = 797

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -2

Query: 191 FVFYLFIL*LGTFNNRINIHH---KNIDIIQFN-MTPVTRDVYKLSPLKFLLD 45
           FVF++F+   GT +  INI+H   K+ID    N  T  T  +YK+S ++ + D
Sbjct: 10  FVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFD 62


>AL356962-1|CAC36327.2|  797|Homo sapiens interphotoreceptor matrix
           proteoglycan 1 protein.
          Length = 797

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -2

Query: 191 FVFYLFIL*LGTFNNRINIHH---KNIDIIQFN-MTPVTRDVYKLSPLKFLLD 45
           FVF++F+   GT +  INI+H   K+ID    N  T  T  +YK+S ++ + D
Sbjct: 10  FVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFD 62


>AF047492-1|AAC03789.2|  797|Homo sapiens interphotoreceptor matrix
           proteoglycan 150 protein.
          Length = 797

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -2

Query: 191 FVFYLFIL*LGTFNNRINIHH---KNIDIIQFN-MTPVTRDVYKLSPLKFLLD 45
           FVF++F+   GT +  INI+H   K+ID    N  T  T  +YK+S ++ + D
Sbjct: 10  FVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFD 62


>AF017776-1|AAC68835.1|  797|Homo sapiens interphotoreceptor matrix
           protein.
          Length = 797

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = -2

Query: 191 FVFYLFIL*LGTFNNRINIHH---KNIDIIQFN-MTPVTRDVYKLSPLKFLLD 45
           FVF++F+   GT +  INI+H   K+ID    N  T  T  +YK+S ++ + D
Sbjct: 10  FVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFD 62


>AK125823-1|BAC86306.1|  154|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43835 fis, clone TESTI4005805. ).
          Length = 154

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 24/72 (33%), Positives = 37/72 (51%)
 Frame = +2

Query: 485 PPDSIFVCIIFFLPILVTSRGHTRFTKLVAAVVVSELTGL*PEDIANTSPSKAVLRSIYH 664
           PP  IF+ I  F+ + +TSR   R  K +  ++ S    L P+  A+   S+ VL S   
Sbjct: 13  PPPFIFIFIFIFMFLSITSRRRPRKAKYLDEMLSSLPVRLQPDSNAS---SRVVLGSC-- 67

Query: 665 RDRERDPLEKDP 700
             R R+PL++ P
Sbjct: 68  --RVREPLKRWP 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,606,669
Number of Sequences: 237096
Number of extensions: 1785826
Number of successful extensions: 2757
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2757
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)