Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30223
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -3

Query: 347  EACKVFHICIRVHVLHCKTWPQCRQTPSE 261
            E+C  F++C+  H++     P     P E
Sbjct: 1216 ESCSSFYVCVNGHLVPQNCAPGLHYNPEE 1244


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 285 RPSFTVKYMHSNAN 326
           +P FT KY H N N
Sbjct: 57  QPGFTGKYCHENIN 70


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 190 SPSCRSDGIPTPECSSANPRLENSS 264
           SPS     +PT   S++NP   + S
Sbjct: 76  SPSSTPSSLPTQRTSTSNPTYSSRS 100


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 232 SSANPRLENSSEGVCRH*GQVLQ*STCT 315
           ++  P   N S+GVC   G V   S C+
Sbjct: 429 TTKTPESGNESDGVCTKEGIVRDPSDCS 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,233
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)