Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30222
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   4.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   5.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   5.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   5.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   5.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   5.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 197 GRDLDKSDVGLDDLPVEQLGDVLKED 120
           G D DK    ++D+  ++  D  KED
Sbjct: 237 GEDKDKDKPKIEDVGEDEDEDTKKED 262


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 5/15 (33%), Positives = 7/15 (46%)
 Frame = -2

Query: 208 WLSGGETWIRAMSGW 164
           W++ G  W     GW
Sbjct: 481 WVTDGNNWCSPYIGW 495


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 131 LKEDGNGVGATFGY*FADVRGHKQRY 54
           L ++ N  G   GY   D  G+K  Y
Sbjct: 376 LPDENNNGGFWVGYEDTDTAGYKASY 401


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 149 PQEDHPARHRSYPGLSPRQPWLLQSGH 229
           P    PA    YP LSP    +  S H
Sbjct: 163 PMYPFPAGQYPYPILSPEMSQVAASWH 189


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 149 PQEDHPARHRSYPGLSPRQPWLLQSGH 229
           P    PA    YP LSP    +  S H
Sbjct: 55  PMYPFPAGQYPYPILSPEMSQVAASWH 81


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 190 TWIRAMSGWMIFLWNSLGMS 131
           TWIRA+   +  LW    +S
Sbjct: 136 TWIRAVRKCLYKLWKMPSLS 155


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 190 TWIRAMSGWMIFLWNSLGMS 131
           TWIRA+   +  LW    +S
Sbjct: 136 TWIRAVRKCLYKLWKMPSLS 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,094
Number of Sequences: 336
Number of extensions: 1434
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)