Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30222
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0141 - 27985539-27985609,27985692-27985749,27986249-279862... 29 0.69
03_02_0574 + 9575496-9575517,9575636-9576418,9576754-9577163,957... 28 2.1
12_02_0219 + 15822050-15824896 27 2.8
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 27 2.8
01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 27 2.8
05_04_0035 + 17378541-17381276 27 3.7
03_02_0796 - 11251958-11251971,11252220-11252301,11252420-112525... 27 4.9
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 27 4.9
01_06_0307 - 28361538-28361606,28361684-28361854,28361963-283620... 27 4.9
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 26 6.4
06_03_0947 + 26248378-26248494,26248600-26248764,26248843-262489... 26 6.4
06_01_0642 + 4658771-4659248,4659322-4660208 26 6.4
04_03_0468 + 16249716-16249822,16250080-16250233,16250788-16251138 26 6.4
03_05_0297 - 22870052-22870342,22870436-22870534,22870624-228707... 26 6.4
03_02_0101 - 5623661-5623669,5623756-5624408,5624504-5624640,562... 26 6.4
10_06_0099 - 10677024-10677073,10677894-10677998,10678254-106783... 26 8.5
10_02_0032 + 4376065-4376743,4376777-4376982 26 8.5
08_02_0952 - 22981116-22981268,22981930-22981974,22982052-229821... 26 8.5
05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778 26 8.5
05_02_0129 - 6897189-6897448,6897581-6898063,6898409-6898604 26 8.5
02_04_0632 + 24614659-24615528,24615636-24616133 26 8.5
>05_07_0141 -
27985539-27985609,27985692-27985749,27986249-27986296,
27986455-27986517,27986599-27986722,27990021-27990358
Length = 233
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +2
Query: 68 GRERPQIXXXXXXXXXXXXPSGHPQAVPQEDHPARHRSYPGLSPRQPWLLQSGHLR 235
G+ RP++ PQE+ A + Y G+ PR+P L+ H R
Sbjct: 124 GQVRPEVDGSDEKVEIANQNEKEVMPSPQEEEAAIKKKYGGIVPRKPALIAKDHER 179
>03_02_0574 +
9575496-9575517,9575636-9576418,9576754-9577163,
9577246-9578079
Length = 682
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 153 RKIIQPDIALIQVSPPDNHGYCSLGTSVDCVRAALVNSKIIIAQVNVN 296
R ++ D A++ + PD +G +L + R+ +VN +++ +NVN
Sbjct: 374 RALVNADPAIVML--PDRNGNLALHVATRKKRSEIVNELLLLPDMNVN 419
>12_02_0219 + 15822050-15824896
Length = 948
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 109 SERPSATDLRTFAAINNDTDLNMSLHSGVTYAA 11
S+ PSA D TFA T L SG+ YAA
Sbjct: 68 SKSPSAIDQTTFARYVERTAFERPLTSGLAYAA 100
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 105 SDAIPIFLQDIPKLFHRKII 164
SD+ P +LQDI KLF +++
Sbjct: 267 SDSAPTYLQDILKLFENRVV 286
>01_07_0009 -
40397276-40397534,40397637-40398745,40398834-40398932,
40399043-40399272,40399534-40399585,40399679-40399865,
40399987-40400193,40400283-40400449,40400804-40401094,
40401166-40401636
Length = 1023
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 109 SERPSATDLRTFAAINNDTDLNMSLHSGVTYA 14
S+ PSA D TFA T L SGV YA
Sbjct: 149 SKTPSAIDQMTFARYAERTAFERPLTSGVAYA 180
>05_04_0035 + 17378541-17381276
Length = 911
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 131 GHPQAVPQEDHPARHRSYPGLSPRQPW 211
GHPQ PQ H A PG PW
Sbjct: 730 GHPQP-PQPMHSAPQTQQPGYGTSHPW 755
>03_02_0796 -
11251958-11251971,11252220-11252301,11252420-11252500,
11252892-11253004,11253081-11253177,11253525-11253839,
11253936-11253984,11254148-11254641,11254772-11254836,
11255074-11255239,11257016-11257654
Length = 704
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 42 IFRSVSLFMAANVRKSVAEGRSDAIPIFLQDIPKL 146
+FRS ++ +V K+ + RS+ P F D P L
Sbjct: 597 LFRSKQSWVKLSVVKTRLQSRSEIAPFFFTDAPSL 631
>01_06_1127 -
34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -1
Query: 221 TAVAMVVGGRDLDKSDVGLDDLPVEQLGDVL 129
TA+A +VG + L++S LDD+ ++L D++
Sbjct: 471 TAIAKMVGMKPLERSLEKLDDVRKKKLSDMI 501
>01_06_0307 -
28361538-28361606,28361684-28361854,28361963-28362027,
28362467-28362565,28363005-28363099,28363199-28363413,
28364394-28364735,28365505-28365645,28365774-28365945,
28366073-28366176,28366799-28366911,28367158-28367222,
28367564-28367691
Length = 592
Score = 26.6 bits (56), Expect = 4.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 223 WAPPWTVSGPRW 258
W PPW + G RW
Sbjct: 412 WRPPWKLEGARW 423
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 204 NHGYCSLGTSVDCVRAALVNSKIIIAQV 287
NHG C+ +D R A ++S +I +V
Sbjct: 1901 NHGLCNGALELDLPRCATISSSVIAVKV 1928
>06_03_0947 +
26248378-26248494,26248600-26248764,26248843-26248952,
26249065-26249179,26249310-26249408,26249485-26249694,
26249802-26250965
Length = 659
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 131 GHPQAVPQEDHPARHRSYPGLSPRQPWLL 217
G + ED+P R P P QPW +
Sbjct: 486 GFKRPAATEDYPVRTNKIPRPIPEQPWYM 514
>06_01_0642 + 4658771-4659248,4659322-4660208
Length = 454
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 269 FGVNQRGPDTVHGGAQTAVAMVVGGRDLDKSDVGLDDLPVEQLGDVLKEDGN 114
FG G T GG TAVA +VGG D + +L + ++ DG+
Sbjct: 389 FGTAFDGAMT-RGGVATAVASLVGGEDGRRMRARAQELQAKVASAFVEPDGS 439
>04_03_0468 + 16249716-16249822,16250080-16250233,16250788-16251138
Length = 203
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 217 AVWAPPWTVSGPRWLTPK 270
A W P W V P W P+
Sbjct: 2 AAWCPGWAVVSPAWRRPE 19
>03_05_0297 -
22870052-22870342,22870436-22870534,22870624-22870728,
22870898-22870990,22871206-22871298,22871449-22871502,
22871604-22871957
Length = 362
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 9 DAAYVTPECKDIFRSVSLFMAANVRKSVAEGRSDAIPIFLQDIP 140
D +++PEC+D+ + + A R S+ E R+ P FL+++P
Sbjct: 244 DYVHISPECRDLIARIFVANPA-TRISIPEIRNH--PWFLKNLP 284
>03_02_0101 -
5623661-5623669,5623756-5624408,5624504-5624640,
5626032-5626609
Length = 458
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 239 VHGGAQTAVAMVVGGRDLDKSDVGLDDLPVEQLGDVLKEDGNGVG 105
V GGA TA A + D+ DD + D EDG G G
Sbjct: 13 VGGGAATATATATAHDEYDERAYDSDDKVSIAVSDSDSEDGGGGG 57
>10_06_0099 -
10677024-10677073,10677894-10677998,10678254-10678315,
10678694-10679197,10679695-10680356,10680695-10680793,
10680881-10681110,10681227-10681278,10681391-10681577,
10681661-10681873,10682006-10682175,10683455-10683730,
10684188-10684643,10685527-10685766,10687517-10687771
Length = 1186
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 106 ERPSATDLRTFAAINNDTDLNMSLHSGVTYA 14
+ PSA D +TF T L SGV YA
Sbjct: 310 KNPSAIDQKTFEDFTARTTFERPLMSGVAYA 340
>10_02_0032 + 4376065-4376743,4376777-4376982
Length = 294
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 152 VEQLGDVLKEDGNGVGATFGY*FADVRGHKQRYRSEYVLAFWG 24
+E VL+E GN GAT + ++R +++ + E WG
Sbjct: 225 IEASRQVLREYGNMSGATIAFVLDELRQCREKEKQEPEQPEWG 267
>08_02_0952 -
22981116-22981268,22981930-22981974,22982052-22982153,
22983262-22983468,22984783-22985042,22985338-22985442,
22986244-22986247,22986877-22986962,22987022-22987064
Length = 334
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 332 HVYYSVAERARHVHVHLSYDDFGVNQRGPDTVHGGA 225
H + +++A+ H ++D GVNQ + H GA
Sbjct: 113 HKRHDRSDKAKLNHAEKDHEDKGVNQAEKEPSHDGA 148
>05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778
Length = 1104
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 207 HGYCSLGTSVDCVRAALVNSKIII 278
HG +L + C+RA+L N++++I
Sbjct: 18 HGATNLEDDLSCLRASLPNARLVI 41
>05_02_0129 - 6897189-6897448,6897581-6898063,6898409-6898604
Length = 312
Score = 25.8 bits (54), Expect = 8.5
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 230 GAQTAVAMVVGGRD-LDKSDVGLDDLPVEQLGD--VLKEDGNGVGATFGY*FADVRGHKQ 60
G QT V GGR LD + L P + VL E GN G T + D+R ++
Sbjct: 222 GMQTTVHP--GGRAILDNIEGELQLQPAKLAASRHVLSEYGNMSGTTIAFVLDDLRRRRE 279
Query: 59 RYRSEYVLAFWG 24
+ E+ WG
Sbjct: 280 KEGDEHQQPEWG 291
>02_04_0632 + 24614659-24615528,24615636-24616133
Length = 455
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 15 AYVTPECKD-IFRSVSLFMAA-NVRKSVAEGRSDAIPIFLQDIPKLF 149
A V C+D + +V ++ NVR +++G D +P+ L+ +P ++
Sbjct: 148 AVVFSNCQDGVEVTVDVYTEMYNVRDGISDGPRDYLPVGLRPLPTIY 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,630,388
Number of Sequences: 37544
Number of extensions: 190803
Number of successful extensions: 640
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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