Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30222
         (332 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical pr...   111   2e-25
Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical pr...    86   5e-18
AL032632-12|CAA21589.3|  333|Caenorhabditis elegans Hypothetical...    79   6e-16
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil...    29   0.81 
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical...    29   0.81 
AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical...    26   5.7  
AC024089-1|AAK09071.1|  641|Caenorhabditis elegans Hypothetical ...    26   5.7  
Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical pr...    25   10.0 

>U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical
           protein C44B7.10 protein.
          Length = 471

 Score =  111 bits (266), Expect = 2e-25
 Identities = 55/99 (55%), Positives = 68/99 (68%)
 Frame = +3

Query: 36  KDIFRSVSLFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGY 215
           +D  RS SLF   N+R  V  G +D    FL ++P LF +  I+ + +LIQVSPPD  G+
Sbjct: 103 RDRIRSNSLFTGHNLRACVNNGIADFNSCFLYEVPLLFRKGAIKLNASLIQVSPPDAFGF 162

Query: 216 CSLGTSVDCVRAALVNSKIIIAQVNVNMPRTFGDAIIHV 332
           CSLGTSVD  RAA+ NS +IIA VN NMPRTFGD +IHV
Sbjct: 163 CSLGTSVDTARAAVTNSPLIIAMVNKNMPRTFGDGVIHV 201


>Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical
           protein ZK1320.9 protein.
          Length = 472

 Score = 86.2 bits (204), Expect = 5e-18
 Identities = 42/91 (46%), Positives = 55/91 (60%)
 Frame = +3

Query: 57  SLFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSV 236
           SLF+    RK+V  G +D  PIFL ++P L+    +  D ALI VSPPD  G+C+LG  +
Sbjct: 112 SLFICPGNRKNVNLGAADYTPIFLSEVPSLYTSGTLNVDFALITVSPPDELGFCTLGVDI 171

Query: 237 DCVRAALVNSKIIIAQVNVNMPRTFGDAIIH 329
           D   AA  ++K IIA VN  MPRT G   +H
Sbjct: 172 DTTLAAATSAKKIIALVNSTMPRTRGHTTVH 202


>AL032632-12|CAA21589.3|  333|Caenorhabditis elegans Hypothetical
           protein Y11D7A.1 protein.
          Length = 333

 Score = 79.4 bits (187), Expect = 6e-16
 Identities = 38/91 (41%), Positives = 53/91 (58%)
 Frame = +3

Query: 57  SLFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSV 236
           SLF+    RK+V  G +D  PIFL ++P ++    +    ALI VSPPD  G+C+LG  +
Sbjct: 54  SLFICPGNRKNVKLGAADYTPIFLSEVPSVYTSGTLNVHFALITVSPPDELGFCTLGVDI 113

Query: 237 DCVRAALVNSKIIIAQVNVNMPRTFGDAIIH 329
           D   AA  ++K IIA  N  MPR+ G   +H
Sbjct: 114 DTTLAAATSAKKIIALANSTMPRSRGHTTVH 144


>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
           ATPase protein.
          Length = 2395

 Score = 29.1 bits (62), Expect = 0.81
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 191 DLDKSDVGLDDLPVEQLGDVLKEDGNGVG 105
           D  K      DL  EQL D   EDGNG G
Sbjct: 472 DAQKPSTSSSDLTAEQLQDPTAEDGNGDG 500


>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
           protein Y111B2A.22 protein.
          Length = 2395

 Score = 29.1 bits (62), Expect = 0.81
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 191 DLDKSDVGLDDLPVEQLGDVLKEDGNGVG 105
           D  K      DL  EQL D   EDGNG G
Sbjct: 472 DAQKPSTSSSDLTAEQLQDPTAEDGNGDG 500


>AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical
           protein Y75B8A.33 protein.
          Length = 341

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 50  SEYVLAFWGYICRILF 3
           + YV   WG +C+ILF
Sbjct: 266 NSYVFVIWGVVCQILF 281


>AC024089-1|AAK09071.1|  641|Caenorhabditis elegans Hypothetical
           protein C36E6.1b protein.
          Length = 641

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 125 PSGHPQAVPQEDHPARHRSYPGLSPRQP 208
           P+G PQ  PQ+  P   +  P L  +QP
Sbjct: 405 PAGMPQPQPQQQPPQMVQVQPNLQGQQP 432


>Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK858.6 protein.
          Length = 619

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 161 HPARHRSYPGLSPRQPWLLQ 220
           HP R    P   P QPW L+
Sbjct: 456 HPVRTNQIPRQVPEQPWFLR 475


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,451,140
Number of Sequences: 27780
Number of extensions: 133206
Number of successful extensions: 359
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)