Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30222
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   0.73 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   2.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   3.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   3.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   9.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   9.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   9.1  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 0.73
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -1

Query: 263 VNQRGPDTVH--GGAQTAVAMVVGGRDLDKSDVGLDDLPV 150
           V+  G   VH  GG+      ++ G  L + D G+D LP+
Sbjct: 179 VDIAGSGAVHLVGGSSALACAIMLGPRLGRYDNGIDPLPL 218


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 56  YRSEYVLAFWGYICRILF 3
           Y +++ LAFW   CR  F
Sbjct: 362 YSADFRLAFWRLTCRKCF 379


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 216 CSLGTSVDCVRAALVNSKIIIAQVNVN 296
           C+L T  DC+R+ L   +  I  ++++
Sbjct: 166 CALTTLTDCLRSELAQCESNIKVISIS 192


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 152 QEDHPARHRSYPGLSPRQ 205
           Q+   A  +S PG+ PRQ
Sbjct: 208 QQSQAASQQSQPGMHPRQ 225


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 23  NPRMQGHIQIGIVVYGRE 76
           NPR +  + IGI+ +G E
Sbjct: 357 NPRTKRLVNIGIISWGAE 374


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 245 DTVHGGAQTAVAMVVGG 195
           DT +GG  +A   VVGG
Sbjct: 2   DTTNGGGSSAGVGVVGG 18


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 125 PSGHPQAVPQEDHPARHRSY 184
           P G   A+P  ++PA +R +
Sbjct: 266 PVGVTAAIPTSENPADYRYF 285


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 125 PSGHPQAVPQEDHPARHRSY 184
           P G   A+P  ++PA +R +
Sbjct: 266 PVGVTAAIPTSENPADYRYF 285


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 125 PSGHPQAVPQEDHPARHRSY 184
           P G   A+P  ++PA +R +
Sbjct: 266 PVGVTAAIPTSENPADYRYF 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,240
Number of Sequences: 438
Number of extensions: 1587
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)