Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30221
(645 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.8
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 22 3.8
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 6.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 6.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 8.7
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 394 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 308
+ +WV I+ +T++ F K CK +I
Sbjct: 129 MTGIWVWLINISATYICYAFGKFSCKVMI 157
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 535 LLLTFILHLCCYKRAEYSRATALNNYSDVEI 627
+L + L+LCC K+ E AL + VEI
Sbjct: 1356 ILASTELNLCCTKKKEELSPNALLDKQAVEI 1386
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 535 LLLTFILHLCCYKRAEYSRATALNNYSDVEI 627
+L + L+LCC K+ E AL + VEI
Sbjct: 1356 ILASTELNLCCTKKKEELSPNALLDKQAVEI 1386
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 394 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 308
+ +WV I+ +T++ F K CK +I
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMI 390
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 394 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 308
+ +WV I+ +T++ F K CK +I
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMI 390
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 535 LLLTFILHLCCYKRAEYSRATALNNYSDVEI 627
+L + L+LCC K+ E AL + VEI
Sbjct: 1356 ILASTELNLCCTKKKEELSPNALLDKQAVEI 1386
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 535 LLLTFILHLCCYKRAEYSRATALNNYSDVEI 627
+L + L+LCC K+ E AL + VEI
Sbjct: 1356 ILASTELNLCCTKKKEELSPNALLDKQAVEI 1386
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 332 IEACKDKCGNKVNEIYPYIIQEIKPTLTELGID 430
++ K+K + + +Y ++++ KP L +G D
Sbjct: 333 LDPTKEKLYDAIEALYGDMLKQFKPPLFHMGGD 365
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 178 FISVIEFFVTFHWTSV*SPYRYG 110
F++V + F W S S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 178 FISVIEFFVTFHWTSV*SPYRYG 110
F++V + F W S S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 404 PTLTELGIDTPEEL 445
PTL ELG DT L
Sbjct: 207 PTLEELGFDTEGRL 220
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,337
Number of Sequences: 336
Number of extensions: 3219
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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