Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30220
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 193 LYQYPHLLLYFGFSCPFSL 137
           L  YPHL  +F FS P ++
Sbjct: 351 LNTYPHLFNFFEFSVPLAI 369


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 666 SDQHHHHGMLHIKSDHRL 719
           +  HHHH   HI + H +
Sbjct: 319 NQNHHHHAGHHIHAQHHV 336


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 657 PLTSDQHHHH 686
           P  S QHHHH
Sbjct: 47  PYASSQHHHH 56


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 406  TKDVAQKNLFDKLNILGVN 462
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 406  TKDVAQKNLFDKLNILGVN 462
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 406  TKDVAQKNLFDKLNILGVN 462
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 406  TKDVAQKNLFDKLNILGVN 462
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 353 SSIVLFALIPNSTSRNFCKAIFFSMS 276
           + I +F  I +++ RNF  A FF ++
Sbjct: 290 NEIKMFVKIVDASCRNFTAARFFELN 315


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 292 FSFLCQYSNQLNRSHCRFFQQ 230
           F FLC+++ +  +++  FF Q
Sbjct: 144 FDFLCRHTVEYFQNYIHFFYQ 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.135    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,876
Number of Sequences: 336
Number of extensions: 2796
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)