Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30219
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth facto... 34 0.53
BC125062-1|AAI25063.1| 599|Homo sapiens ARNTL2 protein protein. 33 0.93
BC125061-1|AAI25062.1| 588|Homo sapiens ARNTL2 protein protein. 33 0.93
BC000172-1|AAH00172.3| 578|Homo sapiens ARNTL2 protein protein. 33 0.93
AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens ... 33 0.93
AF256215-1|AAG34652.1| 602|Homo sapiens cycle-like factor CLIF ... 33 0.93
AF246963-1|AAL50342.1| 588|Homo sapiens brain-muscle-ARNT-like ... 33 0.93
AF246962-1|AAL50341.1| 599|Homo sapiens brain-muscle-ARNT-like ... 33 0.93
AF246961-1|AAL50340.1| 622|Homo sapiens brain-muscle-ARNT-like ... 33 0.93
AF246960-1|AAL50339.1| 636|Homo sapiens brain-muscle-ARNT-like ... 33 0.93
AF231339-1|AAF71307.1| 572|Homo sapiens bHLH-PAS transcription ... 33 0.93
AF231338-1|AAF71306.1| 585|Homo sapiens bHLH-PAS transcription ... 33 0.93
AB039921-1|BAB01485.1| 551|Homo sapiens transcription factor BM... 33 0.93
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 32 1.6
Z84479-2|CAM26437.1| 548|Homo sapiens WAP, follistatin/kazal, i... 31 4.9
X02647-1|CAA26485.1| 351|Homo sapiens c-src protein. 31 4.9
K03218-1|AAA60584.1| 536|Homo sapiens SRC protein. 31 4.9
BC101606-1|AAI01607.1| 548|Homo sapiens WAP, follistatin/kazal,... 31 4.9
BC101602-1|AAI01603.1| 548|Homo sapiens WAP, follistatin/kazal,... 31 4.9
BC051270-1|AAH51270.2| 536|Homo sapiens v-src sarcoma (Schmidt-... 31 4.9
BC011566-1|AAH11566.1| 536|Homo sapiens SRC protein protein. 31 4.9
AL133293-2|CAC34523.1| 536|Homo sapiens v-src sarcoma (Schmidt-... 31 4.9
AL133293-1|CAC10573.1| 542|Homo sapiens v-src sarcoma (Schmidt-... 31 4.9
AK024281-1|BAB14871.1| 251|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF422194-1|AAL18839.1| 548|Homo sapiens putative multivalent pr... 31 4.9
AE006464-5|AAK61237.1| 491|Homo sapiens unknown protein. 31 4.9
AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet re... 30 8.6
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 30 8.6
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 30 8.6
>AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth factor
receptor 4 variant protein.
Length = 1034
Score = 33.9 bits (74), Expect = 0.53
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 50 QNELCVCVCLFIYFIVRKKVC-CISFIWTCMYM*VGVRVPASRALPLSGAS 199
Q+ CVCVC ++ +R VC C+S+ +C V V P S A L AS
Sbjct: 7 QHVPCVCVCPYVCVCMRVCVCVCVSWPLSCALNAVCVTCPKSVAFALGVAS 57
>BC125062-1|AAI25063.1| 599|Homo sapiens ARNTL2 protein protein.
Length = 599
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 194 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 250
>BC125061-1|AAI25062.1| 588|Homo sapiens ARNTL2 protein protein.
Length = 588
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 183 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 239
>BC000172-1|AAH00172.3| 578|Homo sapiens ARNTL2 protein protein.
Length = 578
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 173 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 229
>AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ44225 fis, clone THYMU3006168. ).
Length = 262
Score = 33.1 bits (72), Expect = 0.93
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 59 LCVCVCLFIYFIVRKKVCCISFIWTCMYM 145
+C+ +C+FIY V VC ++TC+Y+
Sbjct: 159 ICIHICIFIYTYVCMCVCSCIHVYTCVYI 187
>AF256215-1|AAG34652.1| 602|Homo sapiens cycle-like factor CLIF
protein.
Length = 602
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 197 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 253
>AF246963-1|AAL50342.1| 588|Homo sapiens brain-muscle-ARNT-like
transcription factor 2d protein.
Length = 588
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 183 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 239
>AF246962-1|AAL50341.1| 599|Homo sapiens brain-muscle-ARNT-like
transcription factor 2c protein.
Length = 599
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 194 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 250
>AF246961-1|AAL50340.1| 622|Homo sapiens brain-muscle-ARNT-like
transcription factor 2b protein.
Length = 622
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 217 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 273
>AF246960-1|AAL50339.1| 636|Homo sapiens brain-muscle-ARNT-like
transcription factor 2a protein.
Length = 636
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 231 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 287
>AF231339-1|AAF71307.1| 572|Homo sapiens bHLH-PAS transcription
factor MOP9 protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.93
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREGEGARRGDTHSNSHIHTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE + DT + +H++ + G T +F + +
Sbjct: 167 LHPKDVAKVKEQLSSFD---ISPRE----KLIDTKTGLQVHSNLHAGRTRVYFGSRR 216
>AF231338-1|AAF71306.1| 585|Homo sapiens bHLH-PAS transcription
factor MOP9 protein.
Length = 585
Score = 33.1 bits (72), Expect = 0.93
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREGEGARRGDTHSNSHIHTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE + DT + +H++ + G T +F + +
Sbjct: 180 LHPKDVAKVKEQLSSFD---ISPRE----KLIDTKTGLQVHSNLHAGRTRVYFGSRR 229
>AB039921-1|BAB01485.1| 551|Homo sapiens transcription factor BMAL2
protein.
Length = 551
Score = 33.1 bits (72), Expect = 0.93
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -1
Query: 259 LHPKNVVAIKDSLISFIYRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 146 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 202
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 162 TRTPTHIYIQVHIKEIQHTFFLTIK*INKHTHTHNSFCHTDILSV 28
T +H + H + HT+ LT+ I+ H HTH S HT L+V
Sbjct: 26 THIHSHTHPLTHSHPLSHTYPLTLTHIHTHPHTHIS-THTHPLTV 69
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 162 TRTPTHIYIQVHIKEIQHTFFLTIK*INKHTHTHNSFCHTDIL 34
T TH + +H HT LT + H HTHN + D++
Sbjct: 171 THALTHSHTHIHTHMHSHTHPLTHTSTHTHPHTHNVWLTQDLV 213
>Z84479-2|CAM26437.1| 548|Homo sapiens WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 1
protein.
Length = 548
Score = 30.7 bits (66), Expect = 4.9
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 620 PPDSYRRP*TSAMPGGRAKPLPTA*Y---SPQASFEEGRVIALGKHRGGELIP*PDGTWQ 450
PP S P T+A P A P+P A Y SPQA + G +L G P P TW+
Sbjct: 164 PPSSPGPPETTARPTPGAAPVPPALYSSPSPQA-VQVGGTASLHCDVSGR--PPPAVTWE 220
Query: 449 KRS 441
K+S
Sbjct: 221 KQS 223
>X02647-1|CAA26485.1| 351|Homo sapiens c-src protein.
Length = 351
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 257 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 305
>K03218-1|AAA60584.1| 536|Homo sapiens SRC protein.
Length = 536
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 442 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 490
>BC101606-1|AAI01607.1| 548|Homo sapiens WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 1
protein.
Length = 548
Score = 30.7 bits (66), Expect = 4.9
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 620 PPDSYRRP*TSAMPGGRAKPLPTA*Y---SPQASFEEGRVIALGKHRGGELIP*PDGTWQ 450
PP S P T+A P A P+P A Y SPQA + G +L G P P TW+
Sbjct: 164 PPSSPGPPETTARPTPGAAPVPPALYSSPSPQA-VQVGGTASLHCDVSGR--PPPAVTWE 220
Query: 449 KRS 441
K+S
Sbjct: 221 KQS 223
>BC101602-1|AAI01603.1| 548|Homo sapiens WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 1,
protein.
Length = 548
Score = 30.7 bits (66), Expect = 4.9
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 620 PPDSYRRP*TSAMPGGRAKPLPTA*Y---SPQASFEEGRVIALGKHRGGELIP*PDGTWQ 450
PP S P T+A P A P+P A Y SPQA + G +L G P P TW+
Sbjct: 164 PPSSPGPPETTARPTPGAAPVPPALYSSPSPQA-VQVGGTASLHCDVSGR--PPPAVTWE 220
Query: 449 KRS 441
K+S
Sbjct: 221 KQS 223
>BC051270-1|AAH51270.2| 536|Homo sapiens v-src sarcoma
(Schmidt-Ruppin A-2) viral oncogene homolog (avian)
protein.
Length = 536
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 442 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 490
>BC011566-1|AAH11566.1| 536|Homo sapiens SRC protein protein.
Length = 536
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 442 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 490
>AL133293-2|CAC34523.1| 536|Homo sapiens v-src sarcoma
(Schmidt-Ruppin A-2) viral oncogenem exchanger), member
2 protein.
Length = 536
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 442 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 490
>AL133293-1|CAC10573.1| 542|Homo sapiens v-src sarcoma
(Schmidt-Ruppin A-2) viral oncogenem exchanger), member
2 protein.
Length = 542
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 448 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 496
>AK024281-1|BAB14871.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ14219 fis, clone NT2RP3003800, highly similar to
Rattus norvegicus tyrosine protein kinase pp60-c-src
mRNA. ).
Length = 251
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 355 FTIASP--ATGVEFIHTTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRC 495
FTI S + G+ TT +P V+R++ V GY M PP C
Sbjct: 157 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 205
>AF422194-1|AAL18839.1| 548|Homo sapiens putative multivalent
protease inhibitor WFIKKN protein.
Length = 548
Score = 30.7 bits (66), Expect = 4.9
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 620 PPDSYRRP*TSAMPGGRAKPLPTA*Y---SPQASFEEGRVIALGKHRGGELIP*PDGTWQ 450
PP S P T+A P A P+P A Y SPQA + G +L G P P TW+
Sbjct: 164 PPSSPGPPETTARPTPGAAPVPPALYSSPSPQA-VQVGGTASLHCDVSGR--PPPAVTWE 220
Query: 449 KRS 441
K+S
Sbjct: 221 KQS 223
>AE006464-5|AAK61237.1| 491|Homo sapiens unknown protein.
Length = 491
Score = 30.7 bits (66), Expect = 4.9
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -3
Query: 620 PPDSYRRP*TSAMPGGRAKPLPTA*Y---SPQASFEEGRVIALGKHRGGELIP*PDGTWQ 450
PP S P T+A P A P+P A Y SPQA + G +L G P P TW+
Sbjct: 107 PPSSPGPPETTARPTPGAAPVPPALYSSPSPQA-VQVGGTASLHCDVSGR--PPPAVTWE 163
Query: 449 KRS 441
K+S
Sbjct: 164 KQS 166
>AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet
receptor for type I collagen protein.
Length = 532
Score = 29.9 bits (64), Expect = 8.6
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 39 YLYDKTNYVCVCVYLFI 89
YLY+KT VC+CV LFI
Sbjct: 30 YLYEKTVCVCLCVCLFI 46
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 162 TRTPTHIYIQVHIKEIQHTFFLTIK*INKHTHTH-NSFCHTDI 37
T T YIQ HI HT+ T +KH H H + HT I
Sbjct: 95 TCTYKRTYIQGHIHTHMHTYTCTCTHTHKHIHAHIHIHTHTHI 137
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 29.9 bits (64), Expect = 8.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 63 VCVCVYLFILLLEKKYVVFPLYGLVCICELECV 161
+CVC+Y+ + + YV ++ +C+C CV
Sbjct: 64 ICVCLYVCVFVCVCMYVYLCVFVCMCLCVCICV 96
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 60 YVCVCVYLFILLLEKKYVVFPLYGLVCICELECVSPRLAPS 182
++CVCVY+ + + Y+ +Y V +C CVS L S
Sbjct: 94 FLCVCVYVSVSVCLCVYLHISVYLCVYVCICVCVSVSLCVS 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,363,615
Number of Sequences: 237096
Number of extensions: 2521681
Number of successful extensions: 6466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6382
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -