Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30219
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.3  
AY094927-1|AAM11280.1|  375|Drosophila melanogaster RH47633p pro...    29   4.4  
AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple...    29   4.4  
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ...    29   4.4  
AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk i...    29   4.4  
AE013599-2314|AAF57978.1|  503|Drosophila melanogaster CG8311-PA...    29   4.4  
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC...    29   4.4  
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB...    29   4.4  
AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA...    29   4.4  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
 Frame = +1

Query: 340   YRHLAFTIASPATGVEFIHTTTWSHCG-HPQCVSRD--LFCH-VPSGYGMSSPPRCFPSA 507
             YRH     A P   V F +    S CG + QC        C  +P  YG  SPP C P  
Sbjct: 18052 YRHCHVAQAEPVQVVHF-NPCQPSPCGPNSQCTESQGQAVCRCLPDYYG--SPPACRPEC 18108

Query: 508   MTRPS--SNEAC 537
              T P   +++AC
Sbjct: 18109 TTNPECPNDKAC 18120


>AY094927-1|AAM11280.1|  375|Drosophila melanogaster RH47633p
           protein.
          Length = 375

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 59  LCVCVCLFIYFIVRKKVCCISFIWTCMYM*VGVRVPASRALPL 187
           L  CV L ++  +RK   C  ++WT M +     +P +R LPL
Sbjct: 221 LVFCVALVLFPTLRKP--CRFYLWTVMLLLAVTCMPVTRPLPL 261


>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
           isoform protein.
          Length = 1299

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLALP 576
           PSG G+++PP      M  PSS+ A   Y A  +   LP
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 412


>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
           isoform protein.
          Length = 1029

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLALP 576
           PSG G+++PP      M  PSS+ A   Y A  +   LP
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 142


>AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk
           isoform protein.
          Length = 963

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLALP 576
           PSG G+++PP      M  PSS+ A   Y A  +   LP
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 76


>AE013599-2314|AAF57978.1|  503|Drosophila melanogaster CG8311-PA
           protein.
          Length = 503

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 59  LCVCVCLFIYFIVRKKVCCISFIWTCMYM*VGVRVPASRALPL 187
           L  CV L ++  +RK   C  ++WT M +     +P +R LPL
Sbjct: 221 LVFCVALVLFPTLRKP--CRFYLWTVMLLLAVTCMPVTRPLPL 261


>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
           isoform C protein.
          Length = 1299

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLALP 576
           PSG G+++PP      M  PSS+ A   Y A  +   LP
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 412


>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
           isoform B protein.
          Length = 1029

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLALP 576
           PSG G+++PP      M  PSS+ A   Y A  +   LP
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 142


>AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA,
           isoform A protein.
          Length = 963

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 PSGYGMSSPPRCFPSAMTRPSSNEACGEY*AVGSGLALP 576
           PSG G+++PP      M  PSS+ A   Y A  +   LP
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILP 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,607,345
Number of Sequences: 53049
Number of extensions: 791854
Number of successful extensions: 2046
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)