Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30218
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    28   0.033
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   3.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   5.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   8.7  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 28.3 bits (60), Expect = 0.033
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +2

Query: 5   AAGTRYGNGPCSGAASWT-RTCRASETWTSCSRSC-CSGSPDSRTTCYQWRLSRCL 166
           AAG  +G   C G  S+  RT     + + C  +  C  +  +RT C   RL +CL
Sbjct: 12  AAGFHFGAFTCEGCKSFFGRTYNNISSISECKNNGECVINKKNRTACKACRLRKCL 67


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 258 QSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQP 359
           Q +PG+  G +  I  +E      H+R +   +P
Sbjct: 299 QEIPGQNPGEKTNIAPRERPRATDHQRRNEPKRP 332



 Score = 21.4 bits (43), Expect = 3.8
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = +3

Query: 198 RPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSW-SYQPWTGDA 374
           RP+ TD     E +R RP +     E + P        G  +       W + QP T + 
Sbjct: 317 RPRATDHQRRNEPKRPRPNIDR--HEVTRPAAPANRGNGFPKRSSDEQQWRNNQPSTSNN 374

Query: 375 R 377
           R
Sbjct: 375 R 375


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 277  SSPGTLCRRGLLRSVSSEYAPSVLCGLLSSPREAL 173
            +SP +  R G  RS + +  P    G LSS  ++L
Sbjct: 935  ASPASSDRSGTPRSTNGDRKPGGSLGALSSMFDSL 969


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 36  HGPLPYLVPA 7
           H P+PYL PA
Sbjct: 163 HQPVPYLTPA 172


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 265 YQVKSQVQGRE-STPRKVSXKSATKGTPGRISPGRETPDRNLPHYGPR 405
           Y + S+   R+ S  R    +S +K  P     GRE   R  P+Y PR
Sbjct: 192 YNLNSKSLPRQYSQSRGRHNQSRSKRQP---KTGREDQTRRNPYYRPR 236


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 352 YDQEFLLWRSSXIPSLA*ILFLG 284
           Y + +  W+S  +P+    LF G
Sbjct: 17  YSKHYSYWQSKNVPTDKPFLFFG 39


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +3

Query: 351 YQPWTGDARSEPAPLRTP 404
           + PW    +  P+P  TP
Sbjct: 64  FHPWKKSPQGAPSPSSTP 81


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 243 SRPRLQSVPGEESGPRKRIY 302
           SRP+LQ     +  PRK  Y
Sbjct: 94  SRPKLQEPQPSQHCPRKHGY 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.310    0.128    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,632
Number of Sequences: 336
Number of extensions: 1911
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.9 bits)