Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30218
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 33 0.025
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 0.40
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.40
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 27 0.93
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 1.6
SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple ca... 26 2.9
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 26 2.9
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 26 2.9
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 25 6.6
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.6
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 24 8.7
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 24 8.7
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 24 8.7
SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 24 8.7
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 24 8.7
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 32.7 bits (71), Expect = 0.025
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 142 SMETEPLPESIELLEGLIEDHKEL---MEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRK 312
S+++ + +IE L+GL H + HTQ+ Q + + +VKS + ++PR+
Sbjct: 725 SIDSNNVQSNIEFLKGLNATHARSTSQVSHTQRLQQSISTSLE--RVKSNTKKESNSPRQ 782
Query: 313 VSXKSATKGTPGRISPGR 366
VS G +I G+
Sbjct: 783 VSKLKRPIGASNKILSGK 800
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 28.7 bits (61), Expect = 0.40
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 166 ESIELLEGLIEDHKELMEHTQKRQNEVD 249
E+ ++LE L E ++L E T+K+Q+E+D
Sbjct: 119 EAHKILENLDEQTRKLSERTEKQQDELD 146
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 28.7 bits (61), Expect = 0.40
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 201 PQRTDGAYSEETERSRPRLQS-VPGEESGPRKRIYAKEGIXEERH-KRNSWSYQPWTGDA 374
P T A +++ S ++ S E+ K KEG E++ +++S + +PW GD
Sbjct: 51 PTNTSRANAQKKTESTGKITSEADTEKYNSSKSPVNKEGSVEKKSSEKSSTNNKPWRGDN 110
Query: 375 RSEPA 389
S+P+
Sbjct: 111 TSKPS 115
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 27.5 bits (58), Expect = 0.93
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 243 SRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQPWTGDARSEPAPLRTPIPAE 416
S PR +VP + + P + E + K S S P + P L TP P +
Sbjct: 119 SNPRYVAVPQKSTSPNQVCSYCEPLPNHLTKTKSCSIPPILNSSDRSPLSLPTPYPVQ 176
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 1.6
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 295 ESTPRKVSXKSATKGTPGRISPGRETPDRNLPHYGPRFPPKGSK 426
+S KSA + SPG +P PH+GP P K
Sbjct: 43 QSPSYSTQPKSAVEPLGLSFSPGYISPSSQSPHHGPVRSPSSRK 86
>SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple
cancers-1 homolog 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 123 SGEPLQQLLEHEVQVSEALHVRVQLAAP 40
+G LQQL+ HE V A H+ L +P
Sbjct: 405 AGYCLQQLVSHEKLVKAACHIDKSLISP 432
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 2.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -1
Query: 283 PDSSPGTLCRRGLLRSVSSEYAPSVLCGLLSSPREALWIQAAAQSP 146
P+ SP + +G+ R + ++ C S + LW+ A+SP
Sbjct: 191 PNQSPASERVKGITRD-KARVTVTICCNATGSEKAPLWVIGYAKSP 235
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 25.8 bits (54), Expect = 2.9
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 279 SGPRKRIYAKE--GIXEERHKRNSWSYQPWTGDARS 380
SG ++ A E G+ + R+ W W+GDAR+
Sbjct: 185 SGQKREYSASELSGVWAVKMVRDLWKRNVWSGDARA 220
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 24.6 bits (51), Expect = 6.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 71 LCMCASSLPPRCMAHCHTSS 12
+C C +S+ P+C HT +
Sbjct: 38 ICWCLTSMRPKCAWRAHTKT 57
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 24.6 bits (51), Expect = 6.6
Identities = 19/82 (23%), Positives = 33/82 (40%)
Frame = +3
Query: 171 HRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWS 350
H + L++ + D + + + P+ SV G PR + + + E +NS S
Sbjct: 630 HISKSNLEKVDVKGDTSPNSVEQGIEPQAASVVGS---PRSSLVSNNSLEEGALLKNSES 686
Query: 351 YQPWTGDARSEPAPLRTPIPAE 416
+ G EP P T + E
Sbjct: 687 LESIYGYLSEEPDPALTKLNTE 708
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 163 PESIELLEGLIEDHKELMEHTQKRQNEVDRVCKAYQVKSQVQGRES 300
P + E L+E H Q +D++CK +V S + + S
Sbjct: 215 PADVPQYEQLLESHTNRPNDVYVTQELIDQLCKQKEVFSAEKEKRS 260
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 301 TPRKVSXKSATKGTPGRISPGRETPDRNLPHYGPRFPPKGSKS 429
+P VS K + R +P R LP Y PR P + + S
Sbjct: 472 SPLPVSMKPSADDH-SRATPTRSVEAPTLPSYAPRHPTQANGS 513
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 309 PWRRFSSLDLTLHLVRFADAVYFVLSLLSML 217
PWR+FSS L R AD + L L+ +
Sbjct: 78 PWRKFSSAQRGRCLSRLADCIEQNLEYLASI 108
>SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 108
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 183 RGLDRRPQRTDGAYSEETERSRPRLQS 263
R ++ QR D A E TE+++ LQS
Sbjct: 40 RAVENEGQRFDKAVGETTEKAKSYLQS 66
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = +1
Query: 205 KELMEHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGTPGRIS 357
K E +QNEV + K V TP SA K R++
Sbjct: 124 KSESEPANSKQNEVVEATSVEKAKENVAHESGTPESGGSTSAPKSKKQRLT 174
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,668,833
Number of Sequences: 5004
Number of extensions: 31647
Number of successful extensions: 129
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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