Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30218
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0642 + 10086400-10086505,10086675-10087014,10087072-100871... 30 0.91
06_03_1009 - 26877888-26877943,26878398-26878854 29 1.2
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 29 2.1
05_01_0428 - 3379116-3379262,3379357-3379537,3379690-3379785,337... 29 2.1
01_01_0869 + 6786136-6788577 29 2.1
10_06_0038 - 9958520-9958763,9959240-9959394 28 2.8
01_01_0693 + 5355081-5355106,5355969-5356056,5356079-5356141,535... 28 2.8
05_07_0140 - 27982037-27983794 28 3.7
06_03_0098 - 16621473-16621511,16621617-16621655,16621741-166220... 27 4.9
01_05_0789 + 25231013-25231570,25231684-25231761,25232590-252326... 27 4.9
01_01_1087 - 8545452-8545772 27 4.9
06_03_1460 - 30312640-30313116,30313457-30313708,30313808-303139... 27 6.4
09_04_0045 + 14094536-14094870,14094958-14095147 27 8.5
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 27 8.5
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 27 8.5
03_05_0005 + 19470301-19471180,19471262-19471905,19472027-19472596 27 8.5
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 27 8.5
03_01_0254 + 1983806-1984882 27 8.5
02_05_0418 + 28807763-28807777,28809216-28809242,28809588-288096... 27 8.5
01_03_0071 + 12203227-12203368,12203551-12203703,12204622-122046... 27 8.5
>03_02_0642 +
10086400-10086505,10086675-10087014,10087072-10087156,
10088679-10088764,10089154-10089331,10089425-10089624,
10089964-10090297
Length = 442
Score = 29.9 bits (64), Expect = 0.91
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 59 RTCRASETWTSCSRSCCSGSPDSRTTCYQWRLSRCLNP*SFSRA 190
+TC + SC R+ G PDS + W L CL P FS A
Sbjct: 114 QTCPYVDRQDSCQRN---GRPDSDYLYWDWHLDDCLLPRLFSYA 154
>06_03_1009 - 26877888-26877943,26878398-26878854
Length = 170
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +3
Query: 72 PQRPGPRARGVAAVAHRTREQL-----AINGD*AAA*IHRASRGLDRRPQRTDGAYSEET 236
P RP ARG+ A+ ++ A++ D A A + ASRG DG + +E
Sbjct: 101 PPRPAGAARGLLALVSHAAARMGPVPRALSADEARA-VDAASRGFPCTTYFIDGHFPDEV 159
Query: 237 ERS 245
ERS
Sbjct: 160 ERS 162
>07_03_0685 -
20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 217 EHTQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGTPGRISPGRETPD 378
+ +++ E+ R+ YQ+ + G E P + K G + P ETPD
Sbjct: 638 DEEKEQSTEIIRLPVPYQLPPKPYGTEDVPWSWDKRYTKKDVYGSVWPRHETPD 691
>05_01_0428 -
3379116-3379262,3379357-3379537,3379690-3379785,
3379886-3380034,3380120-3380392,3380895-3380983,
3381923-3382015,3382143-3382238,3382370-3382477,
3382917-3383208
Length = 507
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 237 ERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQPWTGDARSEPAPLRTPI 407
E+ R+ +PG+ + P +A +ERH R + W +A++ PAP + P+
Sbjct: 38 EQEADRVARLPGQPASPAVSQFAGYVGVDERHGRALFY---WFFEAQASPAPEKKPL 91
>01_01_0869 + 6786136-6788577
Length = 813
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 420 SLRRESGSVVGQVPIWRLPSRADTTRSSFCG 328
SL R SG+ G VP W PS + FCG
Sbjct: 286 SLVRWSGADAGWVPRWTFPSGCKSGGGFFCG 316
>10_06_0038 - 9958520-9958763,9959240-9959394
Length = 132
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 289 GRESTPRKVSXKSATKGTPGRISPGRETPDRNLPHYGPRFP 411
GR S+ RK+ + G PG P + R + + RFP
Sbjct: 46 GRRSSRRKLGRGEPSAGGPGEGRPDTDVLGRGVSRHATRFP 86
>01_01_0693 +
5355081-5355106,5355969-5356056,5356079-5356141,
5356607-5356705
Length = 91
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 180 SRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSWSYQP 359
++ ++R+ QRT+G +ETE R L + GE K+I K+G+ WS +
Sbjct: 12 AKQIERKSQRTNGKCVKETEAIRSEL--LVGENGINDKQI--KKGLLVASRVDGEWS-RG 66
Query: 360 WTGDARSE 383
GDA +E
Sbjct: 67 TIGDALNE 74
>05_07_0140 - 27982037-27983794
Length = 585
Score = 27.9 bits (59), Expect = 3.7
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +3
Query: 99 GVAAVAHRTREQL----AINGD*AAA*IHRASRGLDRRPQRTDGAYSEETE-RSRPRLQS 263
G AA+A +R+ + +++ AAA + R +D +P + + RP+L
Sbjct: 59 GPAALAAASRDSVFDFTSVDDSLAAAAEDSSFRLVDAKPPPRHPRFGPKWRFNQRPQLPQ 118
Query: 264 VPGEESGPRKRIYAKEGIXEERHKRNSWSY 353
EE R+R KE ERH +N+ S+
Sbjct: 119 RRDEEVEARRREAEKERARRERHFQNNRSH 148
>06_03_0098 -
16621473-16621511,16621617-16621655,16621741-16622029,
16622112-16622282,16622361-16623244,16623332-16623775,
16623854-16624561
Length = 857
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/85 (23%), Positives = 34/85 (40%)
Frame = +3
Query: 168 IHRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHKRNSW 347
++ A + L Q + AYS+ E +++ +E R R + N+W
Sbjct: 232 VYEAIKELVAEQQASQEAYSQRREDDL-LTKALGNKEHRGRTRGVGSSVPWKYGFPENAW 290
Query: 348 SYQPWTGDARSEPAPLRTPIPAEGK 422
Y+ WT + + A L I A K
Sbjct: 291 QYKKWTSNKAEKDARLEAKIRASIK 315
>01_05_0789 +
25231013-25231570,25231684-25231761,25232590-25232659,
25232743-25232812,25233262-25233469,25233546-25233716
Length = 384
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 309 EGIXEERHKRNSWSYQPWTGDARSEPAPLRTPIPAEGKQ 425
E R++R++WSY GD+ S A + G++
Sbjct: 49 EATSSSRYRRDAWSYAASDGDSSSSSAAAAAAAASSGRR 87
>01_01_1087 - 8545452-8545772
Length = 106
Score = 27.5 bits (58), Expect = 4.9
Identities = 23/74 (31%), Positives = 28/74 (37%)
Frame = +3
Query: 156 AAA*IHRASRGLDRRPQRTDGAYSEETERSRPRLQSVPGEESGPRKRIYAKEGIXEERHK 335
AAA A+R L R T G Y+ S R + E G AK+G +
Sbjct: 9 AAAAAAAAARALAARVTTTRG-YAASAASSAMRRAAAAVEGKGAAGMTQAKDGSSSSAAR 67
Query: 336 RNSWSYQPWTGDAR 377
SW P TG R
Sbjct: 68 EVSWVPDPVTGHYR 81
>06_03_1460 -
30312640-30313116,30313457-30313708,30313808-30313938,
30314037-30314322
Length = 381
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 358 PGRETPDRNLPHYGPRFPPKGSK 426
PG++ P N P+YG FP GSK
Sbjct: 60 PGKDVPRANKPYYGIDFP--GSK 80
>09_04_0045 + 14094536-14094870,14094958-14095147
Length = 174
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 35 CSGAASWTRTCRASETWTSCSRSCCSGS 118
C S TR RA+ TW C CC S
Sbjct: 10 CFPFLSVTRKKRAAATWKLCPWPCCPAS 37
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 29 GPCSGAASWTRTCRASETWTSCSRSCCSGSPD---SRTTCYQW 148
GP G +T TC ++++ + RSCC D S + C +W
Sbjct: 1532 GPL-GKVKYTVTCYYAKSFEALRRSCCPSELDFLRSISRCKKW 1573
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +1
Query: 250 RVCKAYQVKSQVQGRESTPRKVSXKSATKGTPGRISPGR 366
++CK +++ + G E TP+ + + +G R+ R
Sbjct: 679 KMCKHVPLRTTINGEEKTPKDAAPRGKKQGAQPRVMAPR 717
>03_05_0005 + 19470301-19471180,19471262-19471905,19472027-19472596
Length = 697
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 148 ETEPLPESIELLEGLIEDHKELMEHTQK 231
ETE LP ++LL ++DH+++ + T K
Sbjct: 225 ETELLPAKLDLLMKRLDDHEKMPQGTVK 252
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 26.6 bits (56), Expect = 8.5
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +1
Query: 223 TQKRQNEVDRVCKAYQVKSQVQGRESTPRKVSXKSATKGTPGRISPGRETPDRNLPHYGP 402
T E D +C Y +S ++GR T K + TPGR + + Y P
Sbjct: 67 TMATVKEAD-LCIKYLDRSVLEGRVITVEKAKRRRGRTPTPGRYLGTKSSCVTPARRYSP 125
Query: 403 RFPP 414
+ P
Sbjct: 126 SYSP 129
>03_01_0254 + 1983806-1984882
Length = 358
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 213 DGAYSEETERSRPRLQSVPGE 275
DGAYS E PRLQ V GE
Sbjct: 193 DGAYSIEATCHAPRLQDVYGE 213
>02_05_0418 +
28807763-28807777,28809216-28809242,28809588-28809621,
28809909-28810154,28810518-28810948,28812759-28813418
Length = 470
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 361 GRETPDRNLPHYGPRFPPK 417
G+E P +++P + PRFP K
Sbjct: 377 GKEPPPKHVPRWLPRFPDK 395
>01_03_0071 +
12203227-12203368,12203551-12203703,12204622-12204683,
12204749-12204830,12206029-12206126,12206240-12206657,
12206793-12206915,12207159-12207178
Length = 365
Score = 26.6 bits (56), Expect = 8.5
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 168 IHRASRGLDRRPQRTDGAY-SEETERS-RPRLQSVPGEESGPRKRIYAKEG 314
I+ A L R + D A SEE+ RS RP + GEE+G R + EG
Sbjct: 54 INAAVEMLRERTKEFDFAVISEESIRSLRPEIMKFLGEETGLRLLVLRNEG 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,456,785
Number of Sequences: 37544
Number of extensions: 264121
Number of successful extensions: 918
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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